Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| MER83C | LTR | 154 | 1.47E-05 | 1.406e-08 | Breast |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| ERV1 | 45340 | 450 | 0.01985 |
Found 2 MER83C transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr2 | 135832242 | 135832597 | - | 0.02182 | chr2:135831082-135832278 | Epigenome browser | Genome browser |
| chr16 | 10756249 | 10756581 | + | 0.02651 | chr16:10756461-10757492 | Epigenome browser | Genome browser |