Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
AluSg7 | SINE | 8222 | 1.49E-05 | 0.009171 | Blood |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
Alu | 2317344 | 60206 | 0.05196 |
Found 167 AluSg7 transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr19 | 50057573 | 50057856 | - | 0.0000000007085 | chr19:50051261-50075662 | Epigenome browser | Genome browser |
chr8 | 21764981 | 21765267 | - | 0.04276 | chr8:21765023-21769323 | Epigenome browser | Genome browser |
chr19 | 14634128 | 14634423 | - | 0.00004595 | chr19:14629536-14637715 | Epigenome browser | Genome browser |
chr2 | 42520756 | 42521048 | - | 0.00121 | chr2:42520716-42528899 | Epigenome browser | Genome browser |
chr7 | 851926 | 852074 | + | 0.03541 | chr7:851034-854066 | Epigenome browser | Genome browser |
chr11 | 123175110 | 123175228 | - | 0.01373 | chr11:123171076-123176522 | Epigenome browser | Genome browser |
chr6 | 15297393 | 15297665 | - | 0.002675 | chr6:15295403-15302386 | Epigenome browser | Genome browser |
chr3 | 30721351 | 30721614 | + | 0.000008402 | chr3:30719874-30733293 | Epigenome browser | Genome browser |
chr2 | 38824826 | 38825128 | - | 0.003431 | chr2:38809806-38828290 | Epigenome browser | Genome browser |
chr2 | 38820750 | 38821024 | + | 0.01081 | chr2:38809806-38828290 | Epigenome browser | Genome browser |
chr2 | 135707386 | 135707661 | - | 0.005038 | chr2:135706092-135708478 | Epigenome browser | Genome browser |
chr3 | 150583759 | 150584066 | - | 0.012 | chr3:150582646-150583896 | Epigenome browser | Genome browser |
chr20 | 35671603 | 35671922 | + | 0.00000000000002656 | chr20:35670164-35673847 | Epigenome browser | Genome browser |
chr11 | 118657899 | 118658206 | + | 0.0009854 | chr11:118637991-118659671 | Epigenome browser | Genome browser |
chr19 | 39107606 | 39107913 | + | 0.00007241 | chr19:39103654-39109550 | Epigenome browser | Genome browser |
chr1 | 36804380 | 36804674 | - | 0.0004657 | chr1:36804349-36805614 | Epigenome browser | Genome browser |
chr2 | 85195733 | 85195993 | - | 0.000109 | chr2:85193762-85197173 | Epigenome browser | Genome browser |
chr17 | 55521664 | 55521961 | + | 0.02754 | chr17:55516097-55521707 | Epigenome browser | Genome browser |
chr14 | 53606312 | 53606433 | + | 0.007894 | chr14:53604940-53606326 | Epigenome browser | Genome browser |
chr19 | 15625218 | 15625511 | + | 0.00008037 | chr19:15624440-15626855 | Epigenome browser | Genome browser |
chr12 | 19613279 | 19613585 | - | 0.002786 | chr12:19612733-19615744 | Epigenome browser | Genome browser |
chr13 | 115002429 | 115002710 | + | 0.0003074 | chr13:115000604-115002963 | Epigenome browser | Genome browser |
chr6 | 86347810 | 86348127 | + | 0.03756 | chr6:86345909-86351930 | Epigenome browser | Genome browser |
chr9 | 100865187 | 100865495 | + | 0.000000007429 | chr9:100855092-100881195 | Epigenome browser | Genome browser |
chr6 | 28886779 | 28887086 | - | 0.00775 | chr6:28887015-28891202 | Epigenome browser | Genome browser |
chr4 | 76588765 | 76589061 | + | 0.00428 | chr4:76589025-76597838 | Epigenome browser | Genome browser |
chr12 | 54701589 | 54701913 | - | 0.00434 | chr12:54700434-54701843 | Epigenome browser | Genome browser |
chr9 | 77741500 | 77741806 | - | 0.03757 | chr9:77738369-77743265 | Epigenome browser | Genome browser |
chr2 | 158263691 | 158263998 | - | 0.0005715 | chr2:158261742-158264310 | Epigenome browser | Genome browser |
chr4 | 40208547 | 40208840 | + | 0.000000000001591 | chr4:40202722-40253801 | Epigenome browser | Genome browser |
chr5 | 171495063 | 171495354 | + | 0.000003336 | chr5:171490830-171500188 | Epigenome browser | Genome browser |
chr2 | 99085680 | 99085979 | + | 0.001885 | chr2:99062124-99107682 | Epigenome browser | Genome browser |
chr22 | 20867556 | 20867863 | - | 0.01413 | chr22:20862611-20870369 | Epigenome browser | Genome browser |
chr20 | 39776209 | 39776505 | + | 0.02838 | chr20:39767021-39792348 | Epigenome browser | Genome browser |
chr1 | 40707641 | 40707934 | - | 0.0000000958 | chr1:40706318-40708793 | Epigenome browser | Genome browser |
chr16 | 22370453 | 22370744 | - | 0.01136 | chr16:22362554-22374864 | Epigenome browser | Genome browser |
chrX | 153658450 | 153658764 | - | 0.04426 | chrX:153657363-153658939 | Epigenome browser | Genome browser |
chr8 | 130971030 | 130971334 | + | 0.000007362 | chr8:130967504-130974731 | Epigenome browser | Genome browser |
chr5 | 98257575 | 98257870 | + | 0.006014 | chr5:98252276-98263331 | Epigenome browser | Genome browser |
chr10 | 64895885 | 64896057 | - | 0.01863 | chr10:64893398-64898207 | Epigenome browser | Genome browser |
chr9 | 19099912 | 19100204 | + | 0.03816 | chr9:19099976-19102382 | Epigenome browser | Genome browser |
chr6 | 42743750 | 42744074 | - | 0.004732 | chr6:42739218-42749312 | Epigenome browser | Genome browser |
chr9 | 77705998 | 77706266 | - | 0.02779 | chr9:77703961-77714092 | Epigenome browser | Genome browser |
chr2 | 69878933 | 69879090 | - | 0.003308 | chr2:69871341-69881160 | Epigenome browser | Genome browser |
chr6 | 15312301 | 15312583 | - | 0.02415 | chr6:15302643-15321469 | Epigenome browser | Genome browser |
chr17 | 29138541 | 29138846 | + | 0.00001251 | chr17:29131175-29138895 | Epigenome browser | Genome browser |
chr12 | 116573709 | 116574005 | - | 0.01384 | chr12:116557708-116576949 | Epigenome browser | Genome browser |
chr1 | 246116722 | 246117020 | - | 0.000408 | chr1:246115514-246121747 | Epigenome browser | Genome browser |
chr2 | 43456987 | 43457269 | - | 0.0001133 | chr2:43454537-43457904 | Epigenome browser | Genome browser |
chrX | 16806733 | 16806781 | + | 0.0444 | chrX:16805485-16807622 | Epigenome browser | Genome browser |
chr11 | 2914754 | 2915048 | - | 0.007888 | chr11:2911901-2914843 | Epigenome browser | Genome browser |
chr10 | 82235348 | 82235640 | - | 0.001978 | chr10:82215028-82238850 | Epigenome browser | Genome browser |
chr17 | 64242246 | 64242540 | + | 0.0000002189 | chr17:64241440-64244808 | Epigenome browser | Genome browser |
chr12 | 108969573 | 108969877 | - | 0.00009763 | chr12:108956668-108970717 | Epigenome browser | Genome browser |
chr6 | 74152959 | 74153259 | - | 0.02815 | chr6:74150842-74152983 | Epigenome browser | Genome browser |
chr15 | 31643935 | 31644226 | + | 0.000001526 | chr15:31620821-31665582 | Epigenome browser | Genome browser |
chr16 | 89553902 | 89554205 | + | 0.000842 | chr16:89530864-89555740 | Epigenome browser | Genome browser |
chr17 | 37080956 | 37081244 | - | 0.009402 | chr17:37080843-37083459 | Epigenome browser | Genome browser |
chrX | 13097709 | 13098008 | - | 0.02571 | chrX:13091080-13121937 | Epigenome browser | Genome browser |
chr1 | 179266474 | 179266763 | - | 0.005976 | chr1:179263562-179271886 | Epigenome browser | Genome browser |
chr11 | 48029808 | 48030109 | - | 0.01267 | chr11:48017694-48044766 | Epigenome browser | Genome browser |
chr18 | 20939069 | 20939364 | + | 0.000004412 | chr18:20938186-20939431 | Epigenome browser | Genome browser |
chr3 | 150888051 | 150888360 | - | 0.00002455 | chr3:150885657-150891143 | Epigenome browser | Genome browser |
chr17 | 65252984 | 65253255 | + | 0.02582 | chr17:65253045-65255909 | Epigenome browser | Genome browser |
chr1 | 28970293 | 28970581 | + | 0.02527 | chr1:28970178-28971802 | Epigenome browser | Genome browser |
chr3 | 186737806 | 186738110 | + | 0.01116 | chr3:186735625-186744850 | Epigenome browser | Genome browser |
chr21 | 34634391 | 34634690 | + | 0.008636 | chr21:34630896-34635483 | Epigenome browser | Genome browser |
chr17 | 78245802 | 78246111 | + | 0.02589 | chr17:78238469-78248547 | Epigenome browser | Genome browser |
chr19 | 8544980 | 8545250 | + | 0.01421 | chr19:8545161-8546850 | Epigenome browser | Genome browser |
chr19 | 41260006 | 41260304 | - | 0.000001539 | chr19:41257681-41263799 | Epigenome browser | Genome browser |
chr18 | 2641226 | 2641518 | - | 0.001075 | chr18:2630929-2645996 | Epigenome browser | Genome browser |
chr5 | 54947077 | 54947375 | - | 0.001076 | chr5:54945261-54947202 | Epigenome browser | Genome browser |
chr20 | 43658749 | 43659044 | - | 0.04041 | chr20:43652696-43674812 | Epigenome browser | Genome browser |
chr9 | 91936300 | 91936593 | + | 0.003477 | chr9:91933803-91941039 | Epigenome browser | Genome browser |
chr12 | 96774062 | 96774366 | - | 0.005132 | chr12:96763392-96779322 | Epigenome browser | Genome browser |
chr15 | 81585762 | 81585971 | + | 0.00005549 | chr15:81575650-81589409 | Epigenome browser | Genome browser |
chr5 | 126098311 | 126098619 | - | 0.00001129 | chr5:126097624-126098933 | Epigenome browser | Genome browser |
chr14 | 51256011 | 51256328 | + | 0.000007097 | chr14:51255886-51264626 | Epigenome browser | Genome browser |
chrX | 1689163 | 1689444 | + | 0.0000000000004898 | chrX:1688236-1692162 | Epigenome browser | Genome browser |
chr3 | 136583789 | 136584097 | - | 0.007179 | chr3:136583978-136589833 | Epigenome browser | Genome browser |
chr17 | 80378445 | 80378741 | - | 0.01145 | chr17:80376635-80378773 | Epigenome browser | Genome browser |
chr8 | 29954909 | 29955201 | + | 0.0001458 | chr8:29954031-29968121 | Epigenome browser | Genome browser |
chr17 | 73867796 | 73868099 | - | 0.02076 | chr17:73868053-73870635 | Epigenome browser | Genome browser |
chr1 | 109967622 | 109967701 | + | 0.0000241 | chr1:109963321-109968264 | Epigenome browser | Genome browser |
chr4 | 2475258 | 2475548 | + | 0.0008628 | chr4:2471398-2490393 | Epigenome browser | Genome browser |
chr2 | 85053676 | 85053955 | - | 0.01659 | chr2:85051791-85094875 | Epigenome browser | Genome browser |
chr17 | 65397680 | 65397988 | + | 0.00005029 | chr17:65393118-65401262 | Epigenome browser | Genome browser |
chr11 | 117820588 | 117820890 | + | 0.001703 | chr11:117814610-117827694 | Epigenome browser | Genome browser |
chr17 | 56420168 | 56420448 | - | 0.000001617 | chr17:56415449-56427861 | Epigenome browser | Genome browser |
chr6 | 17701613 | 17701915 | + | 0.0002142 | chr6:17696908-17705994 | Epigenome browser | Genome browser |
chr19 | 6776791 | 6777064 | - | 0.03713 | chr19:6773290-6780091 | Epigenome browser | Genome browser |
chr5 | 55274274 | 55274560 | + | 0.00008474 | chr5:55272017-55284395 | Epigenome browser | Genome browser |
chr6 | 26053184 | 26053467 | - | 0.007011 | chr6:26053423-26055311 | Epigenome browser | Genome browser |
chr6 | 31621758 | 31622041 | + | 0.004375 | chr6:31620727-31622202 | Epigenome browser | Genome browser |
chr6 | 159073584 | 159073872 | - | 0.0000278 | chr6:159073010-159078952 | Epigenome browser | Genome browser |
chr12 | 56322182 | 56322490 | + | 0.00000001154 | chr12:56321985-56325433 | Epigenome browser | Genome browser |
chr13 | 41509812 | 41510044 | - | 0.01003 | chr13:41506204-41509999 | Epigenome browser | Genome browser |
chr12 | 120674278 | 120674577 | - | 0.03523 | chr12:120662388-120684293 | Epigenome browser | Genome browser |
chr2 | 197985654 | 197985909 | - | 0.00002806 | chr2:197985343-197988394 | Epigenome browser | Genome browser |
chr13 | 41228333 | 41228667 | + | 0.009195 | chr13:41158794-41238117 | Epigenome browser | Genome browser |
chr1 | 39558444 | 39558754 | - | 0.001526 | chr1:39557326-39558851 | Epigenome browser | Genome browser |
chr17 | 56427594 | 56427871 | + | 0.0001157 | chr17:56415449-56427861 | Epigenome browser | Genome browser |
chr1 | 53169776 | 53170083 | + | 0.006003 | chr1:53167975-53170018 | Epigenome browser | Genome browser |
chr17 | 28049013 | 28049309 | + | 0.00344 | chr17:28042569-28057592 | Epigenome browser | Genome browser |
chr7 | 404006 | 404301 | + | 0.00000005743 | chr7:401556-407453 | Epigenome browser | Genome browser |
chr17 | 65523539 | 65523830 | + | 0.001846 | chr17:65522602-65523576 | Epigenome browser | Genome browser |
chr6 | 109803702 | 109803820 | - | 0.03813 | chr6:109796073-109804091 | Epigenome browser | Genome browser |
chr19 | 1078444 | 1078707 | - | 0.000005432 | chr19:1078102-1082227 | Epigenome browser | Genome browser |
chr17 | 7451140 | 7451446 | - | 0.00000174 | chr17:7450708-7452302 | Epigenome browser | Genome browser |
chr5 | 80355384 | 80355689 | + | 0.02018 | chr5:80355611-80357491 | Epigenome browser | Genome browser |
chr7 | 35869516 | 35869805 | + | 0.01288 | chr7:35867752-35873588 | Epigenome browser | Genome browser |
chr18 | 9932824 | 9933099 | + | 0.04646 | chr18:9915074-9932872 | Epigenome browser | Genome browser |
chrX | 123123443 | 123123750 | - | 0.038 | chrX:123123546-123125499 | Epigenome browser | Genome browser |
chr19 | 13277952 | 13278237 | - | 0.000001835 | chr19:13266509-13285372 | Epigenome browser | Genome browser |
chr11 | 125379564 | 125379865 | - | 0.03451 | chr11:125378439-125380215 | Epigenome browser | Genome browser |
chr19 | 38540276 | 38540387 | - | 0.02566 | chr19:38536918-38541029 | Epigenome browser | Genome browser |
chr5 | 86736988 | 86737280 | + | 0.0001956 | chr5:86736831-86738174 | Epigenome browser | Genome browser |
chr9 | 134128486 | 134128789 | - | 0.00000000000007552 | chr9:134126522-134134883 | Epigenome browser | Genome browser |
chr9 | 135201453 | 135201625 | - | 0.004465 | chr9:135198382-135204811 | Epigenome browser | Genome browser |
chr11 | 65656903 | 65657105 | - | 0.006039 | chr11:65656037-65658061 | Epigenome browser | Genome browser |
chr2 | 228370443 | 228370757 | - | 0.002843 | chr2:228366071-228381751 | Epigenome browser | Genome browser |
chr12 | 4015645 | 4015778 | - | 0.01111 | chr12:4015608-4018387 | Epigenome browser | Genome browser |
chr1 | 27065358 | 27065677 | - | 0.002561 | chr1:27063180-27075392 | Epigenome browser | Genome browser |
chr10 | 74005179 | 74005478 | + | 0.01168 | chr10:74000798-74017896 | Epigenome browser | Genome browser |
chr5 | 5426279 | 5426577 | + | 0.03276 | chr5:5423159-5435045 | Epigenome browser | Genome browser |
chr17 | 57234010 | 57234287 | - | 0.008164 | chr17:57232961-57235102 | Epigenome browser | Genome browser |
chr17 | 74187412 | 74187703 | + | 0.0000000000443 | chr17:74180165-74198881 | Epigenome browser | Genome browser |
chr11 | 60768671 | 60768972 | - | 0.00003014 | chr11:60742501-60780052 | Epigenome browser | Genome browser |
chr11 | 64628212 | 64628509 | + | 0.000000001782 | chr11:64614170-64644975 | Epigenome browser | Genome browser |
chr9 | 34666663 | 34666941 | + | 0.001602 | chr9:34665608-34667071 | Epigenome browser | Genome browser |
chr3 | 20095610 | 20095906 | - | 0.0003753 | chr3:20082886-20100720 | Epigenome browser | Genome browser |
chr3 | 31623779 | 31624084 | - | 0.007328 | chr3:31622770-31626283 | Epigenome browser | Genome browser |
chr11 | 47562155 | 47562437 | + | 0.00005235 | chr11:47551186-47567150 | Epigenome browser | Genome browser |
chr18 | 3249627 | 3249929 | + | 0.000000005124 | chr18:3248808-3261609 | Epigenome browser | Genome browser |
chr1 | 86855824 | 86856114 | + | 0.003933 | chr1:86852422-86857760 | Epigenome browser | Genome browser |
chr12 | 731018 | 731305 | + | 0.003281 | chr12:731180-733169 | Epigenome browser | Genome browser |
chr6 | 42008310 | 42008616 | + | 0.04358 | chr6:42002171-42015404 | Epigenome browser | Genome browser |
chr1 | 93647174 | 93647469 | - | 0.0000003587 | chr1:93646838-93649731 | Epigenome browser | Genome browser |
chr13 | 41927081 | 41927249 | + | 0.00631 | chr13:41926603-41935190 | Epigenome browser | Genome browser |
chr6 | 161505897 | 161506191 | + | 0.01965 | chr6:161494241-161506146 | Epigenome browser | Genome browser |
chr19 | 54889026 | 54889306 | - | 0.01978 | chr19:54882176-54892449 | Epigenome browser | Genome browser |
chr9 | 36574852 | 36575151 | + | 0.003445 | chr9:36575028-36576672 | Epigenome browser | Genome browser |
chr11 | 46693006 | 46693309 | + | 0.00004358 | chr11:46690122-46699581 | Epigenome browser | Genome browser |
chr2 | 102336192 | 102336479 | + | 0.001343 | chr2:102315351-102347580 | Epigenome browser | Genome browser |
chr7 | 140177112 | 140177421 | - | 0.0000009484 | chr7:140174899-140178390 | Epigenome browser | Genome browser |
chr15 | 65130079 | 65130380 | - | 0.0000003449 | chr15:65127128-65133910 | Epigenome browser | Genome browser |
chr13 | 53198243 | 53198544 | - | 0.002555 | chr13:53196271-53198507 | Epigenome browser | Genome browser |
chr3 | 17192602 | 17192907 | + | 0.04573 | chr3:17191332-17195461 | Epigenome browser | Genome browser |
chr17 | 78823331 | 78823617 | - | 0.01411 | chr17:78819810-78823791 | Epigenome browser | Genome browser |
chr1 | 109967118 | 109967329 | + | 0.001189 | chr1:109963321-109968264 | Epigenome browser | Genome browser |
chr17 | 65406929 | 65407214 | + | 0.002748 | chr17:65407087-65408672 | Epigenome browser | Genome browser |
chr4 | 146047454 | 146047745 | - | 0.001404 | chr4:146046483-146048673 | Epigenome browser | Genome browser |
chr10 | 22864588 | 22864893 | + | 0.01454 | chr10:22861419-22865272 | Epigenome browser | Genome browser |
chr12 | 14559600 | 14559823 | - | 0.005034 | chr12:14534699-14586990 | Epigenome browser | Genome browser |
chr11 | 66439203 | 66439517 | - | 0.004156 | chr11:66437823-66439951 | Epigenome browser | Genome browser |
chr12 | 6743974 | 6744282 | + | 0.001485 | chr12:6744044-6746111 | Epigenome browser | Genome browser |
chr16 | 53531674 | 53531959 | - | 0.009153 | chr16:53530990-53536578 | Epigenome browser | Genome browser |
chr14 | 53206715 | 53207013 | + | 0.001679 | chr14:53197201-53214118 | Epigenome browser | Genome browser |
chr11 | 118785565 | 118785851 | + | 0.00009418 | chr11:118777080-118794424 | Epigenome browser | Genome browser |
chr6 | 74152312 | 74152619 | - | 0.002303 | chr6:74150842-74152983 | Epigenome browser | Genome browser |
chr1 | 114322363 | 114322658 | + | 0.005327 | chr1:114319038-114338015 | Epigenome browser | Genome browser |
chr4 | 57670385 | 57670673 | + | 0.04715 | chr4:57669433-57671588 | Epigenome browser | Genome browser |
chr10 | 17550883 | 17551174 | + | 0.0001679 | chr10:17550471-17554447 | Epigenome browser | Genome browser |
chr12 | 46363686 | 46363976 | - | 0.0121 | chr12:46362853-46366675 | Epigenome browser | Genome browser |
chr21 | 37440813 | 37441137 | - | 0.002753 | chr21:37441078-37442305 | Epigenome browser | Genome browser |
chr5 | 56538889 | 56539191 | - | 0.01062 | chr5:56538942-56540683 | Epigenome browser | Genome browser |
chr5 | 50035568 | 50035882 | - | 0.01302 | chr5:50035645-50047938 | Epigenome browser | Genome browser |