Transposable elements methylation details:

Transposable ElementsClassCopy Numberp-value by RAPp-value by uniquely readsHypomethylated in
MER89LTR13756.35E-061.372e-07Breast

TE Information :

FamilyTotal baseCpG countCpG content
ERV142764828810.01347

Found 30 MER89 transposable elements were hypo-methylated:

ChromosomeStartEndStrandANOVA pvalueDetected H3K4me1 peaksEpigenome browser linkGenome browser link
chr56355756163557770-0.001714chr5:63557338-63558067Epigenome browserGenome browser
chr75093469050934930-0.01817chr7:50933922-50935236Epigenome browserGenome browser
chr107969965379700155+0.003979chr10:79698539-79699942Epigenome browserGenome browser
chr102029266020292901-0.04324chr10:20292103-20295144Epigenome browserGenome browser
chr5179287299179287372+0.00000005399chr5:179286497-179287430Epigenome browserGenome browser
chr15101547690101548084-0.001328chr15:101547491-101548574Epigenome browserGenome browser
chr13111658190111658706-0.00000006723chr13:111657501-111659156Epigenome browserGenome browser
chr5179287393179287674+0.00000001038chr5:179286497-179287430Epigenome browserGenome browser
chr6155904911155905363-0.0113chr6:155904503-155905494Epigenome browserGenome browser
chr167868235578682784+0.01666chr16:78682061-78682840Epigenome browserGenome browser
chr2102584730102584970-0.001491chr2:102583181-102586037Epigenome browserGenome browser
chr2038550213855466-0.00000003173chr20:3854446-3855877Epigenome browserGenome browser
chr214311257543112918-0.0000343chr21:43111123-43113162Epigenome browserGenome browser
chr479263687926891+0.003173chr4:7925489-7926535Epigenome browserGenome browser
chr22083161620832067+0.003014chr2:20831358-20833047Epigenome browserGenome browser
chr1193365406193365700+0.00001314chr1:193365292-193366333Epigenome browserGenome browser
chr213585561135856026-0.03868chr21:35855533-35856538Epigenome browserGenome browser
chr1150504683150504723+0.0000007643chr1:150503794-150504917Epigenome browserGenome browser
chr34173033041730762+0.0001783chr3:41730000-41730809Epigenome browserGenome browser
chr12128622286128622615+0.002194chr12:128622115-128623729Epigenome browserGenome browser
chr87396211573962552-0.004892chr8:73960900-73963781Epigenome browserGenome browser
chr12133187420133187480+0.02863chr12:133187272-133187893Epigenome browserGenome browser
chr737946463795021-0.0001721chr7:3794508-3795239Epigenome browserGenome browser
chr185764557257645778+0.000015chr18:57645541-57646391Epigenome browserGenome browser
chr195775245557752825+0.000003435chr19:57752532-57754660Epigenome browserGenome browser
chr14105164902105164960-0.02261chr14:105156404-105166983Epigenome browserGenome browser
chr14105164965105165026-0.0002479chr14:105156404-105166983Epigenome browserGenome browser
chr14105164659105164790-0.002002chr14:105156404-105166983Epigenome browserGenome browser
chr1150503966150504408+0.01006chr1:150503794-150504917Epigenome browserGenome browser
chr61384911813849608-0.002911chr6:13849031-13849767Epigenome browserGenome browser