Transposable elements methylation details:

Transposable ElementsClassCopy Numberp-value by RAPp-value by uniquely readsHypomethylated in
MER77LTR12872.32E-051.4e-08Breast

TE Information :

FamilyTotal baseCpG countCpG content
ERVL49157836880.015

Found 16 MER77 transposable elements were hypo-methylated:

ChromosomeStartEndStrandANOVA pvalueDetected H3K4me1 peaksEpigenome browser linkGenome browser link
chr11103345411033644+0.04175chr1:11033219-11036156Epigenome browserGenome browser
chr6116707496116708025-0.02447chr6:116706104-116708830Epigenome browserGenome browser
chr427622852762758+0.0001985chr4:2762581-2763889Epigenome browserGenome browser
chr82960030229600438+0.008324chr8:29593850-29600324Epigenome browserGenome browser
chr109465187394652431-0.0000804chr10:94650254-94652364Epigenome browserGenome browser
chr2153638515153639095+0.00004996chr2:153638445-153639412Epigenome browserGenome browser
chr135478457854785265+0.0009195chr13:54784370-54785218Epigenome browserGenome browser
chr9137346603137347172+0.0000403chr9:137347008-137349419Epigenome browserGenome browser
chr204576217145762734-0.00005598chr20:45761877-45763559Epigenome browserGenome browser
chr106165546461655928+0.000000009059chr10:61653159-61656190Epigenome browserGenome browser
chr168574635085746602+0.00618chr16:85745418-85747170Epigenome browserGenome browser
chr195157353651574095-0.002572chr19:51573084-51574365Epigenome browserGenome browser
chr8133074994133075585+0.01863chr8:133074932-133076713Epigenome browserGenome browser
chr5174771144174771755-0.000002909chr5:174770885-174772704Epigenome browserGenome browser
chr195055326750553610+0.003689chr19:50552938-50553833Epigenome browserGenome browser
chr194689501446895431-0.0003758chr19:46894001-46895530Epigenome browserGenome browser