Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| MER66A | LTR | 323 | 4.54E-06 | 6.18e-08 | Brain |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| ERV1 | 113672 | 1200 | 0.02111 |
Found 3 MER66A transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr19 | 46975922 | 46976174 | - | 0.008187 | chr19:46974900-46976127 | Epigenome browser | Genome browser |
| chr11 | 65951063 | 65951493 | - | 0.0141 | chr11:65951017-65951377 | Epigenome browser | Genome browser |
| chr20 | 45097224 | 45097490 | - | 0.000002791 | chr20:45097154-45097481 | Epigenome browser | Genome browser |