Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
MER51E | LTR | 249 | 1.03E-05 | 1.369e-09 | Brain |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
ERV1 | 72693 | 897 | 0.02468 |
Found 2 MER51E transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr1 | 5899117 | 5899625 | + | 0.01717 | chr1:5899601-5900065 | Epigenome browser | Genome browser |
chr10 | 20937397 | 20937911 | - | 0.01181 | chr10:20937280-20937666 | Epigenome browser | Genome browser |