Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| MER51D | LTR | 154 | 9.22E-06 | 0.1002 | Brain |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| ERV1 | 37783 | 388 | 0.02054 |
Found 2 MER51D transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr1 | 16845394 | 16845871 | + | 0.00006635 | chr1:16845626-16846326 | Epigenome browser | Genome browser |
| chr19 | 33720820 | 33721296 | - | 0.04293 | chr19:33721292-33721489 | Epigenome browser | Genome browser |