Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| MER126 | DNA | 213 | 6.77E-07 | 1.847e-05 | Brain |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| DNA | 29436 | 164 | 0.01114 |
Found 6 MER126 transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr11 | 131672200 | 131672313 | + | 0.00007572 | chr11:131672052-131672739 | Epigenome browser | Genome browser |
| chr7 | 141024626 | 141024903 | + | 0.02659 | chr7:141024739-141025151 | Epigenome browser | Genome browser |
| chr17 | 9274133 | 9274166 | + | 0.02219 | chr17:9274021-9274317 | Epigenome browser | Genome browser |
| chr11 | 8680378 | 8680504 | - | 0.0001006 | chr11:8680039-8680414 | Epigenome browser | Genome browser |
| chr5 | 133262563 | 133262634 | + | 0.04479 | chr5:133262044-133262960 | Epigenome browser | Genome browser |
| chr5 | 153713726 | 153713807 | - | 0.00892 | chr5:153713081-153713823 | Epigenome browser | Genome browser |