Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
MER125 | DNA | 140 | 6.09E-07 | 2.332e-06 | Brain |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
DNA | 16704 | 109 | 0.01305 |
Found 4 MER125 transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr13 | 46477584 | 46477738 | + | 0.0225 | chr13:46477638-46477920 | Epigenome browser | Genome browser |
chr1 | 169968721 | 169968875 | + | 0.0003512 | chr1:169968628-169969260 | Epigenome browser | Genome browser |
chr18 | 76179334 | 76179434 | - | 0.03075 | chr18:76179030-76179582 | Epigenome browser | Genome browser |
chr10 | 73310811 | 73310953 | + | 0.00000448 | chr10:73310534-73310954 | Epigenome browser | Genome browser |