Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
MER102b | DNA | 4062 | 5.24E-05 | 1.379e-06 | Breast |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
hAT-Charlie | 776480 | 5988 | 0.01542 |
Found 172 MER102b transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr16 | 81345100 | 81345283 | + | 0.0001183 | chr16:81344032-81346006 | Epigenome browser | Genome browser |
chr8 | 118872826 | 118873107 | + | 0.0001221 | chr8:118872386-118873666 | Epigenome browser | Genome browser |
chr12 | 111183354 | 111183650 | - | 0.000002071 | chr12:111181463-111183876 | Epigenome browser | Genome browser |
chr7 | 104897112 | 104897300 | + | 0.00356 | chr7:104896550-104897976 | Epigenome browser | Genome browser |
chr4 | 122298378 | 122298524 | + | 0.02481 | chr4:122294480-122299689 | Epigenome browser | Genome browser |
chr12 | 48289503 | 48289739 | + | 0.03396 | chr12:48282851-48297993 | Epigenome browser | Genome browser |
chr16 | 69759889 | 69760057 | - | 0.005346 | chr16:69758515-69760058 | Epigenome browser | Genome browser |
chr5 | 178695068 | 178695122 | + | 0.00106 | chr5:178690251-178704363 | Epigenome browser | Genome browser |
chr3 | 46949802 | 46950046 | + | 0.000000004953 | chr3:46948642-46952013 | Epigenome browser | Genome browser |
chr20 | 37209161 | 37209405 | + | 0.01241 | chr20:37207251-37211077 | Epigenome browser | Genome browser |
chr6 | 43706858 | 43706920 | - | 0.00001504 | chr6:43704321-43707241 | Epigenome browser | Genome browser |
chr15 | 100559736 | 100559984 | - | 0.01242 | chr15:100559141-100560422 | Epigenome browser | Genome browser |
chr1 | 12465117 | 12465457 | - | 0.003989 | chr1:12465051-12469226 | Epigenome browser | Genome browser |
chr18 | 43853323 | 43853551 | - | 0.003608 | chr18:43852434-43854637 | Epigenome browser | Genome browser |
chr2 | 228281072 | 228281201 | - | 0.04973 | chr2:228280582-228281203 | Epigenome browser | Genome browser |
chr20 | 48803755 | 48803979 | - | 0.0001001 | chr20:48803597-48805433 | Epigenome browser | Genome browser |
chr8 | 122158695 | 122158767 | + | 0.04492 | chr8:122157950-122159199 | Epigenome browser | Genome browser |
chr18 | 60427301 | 60427604 | + | 0.04934 | chr18:60427140-60428011 | Epigenome browser | Genome browser |
chr20 | 45728798 | 45729107 | + | 0.0388 | chr20:45728550-45729501 | Epigenome browser | Genome browser |
chr17 | 16924168 | 16924265 | + | 0.0001435 | chr17:16920130-16926579 | Epigenome browser | Genome browser |
chr16 | 53118851 | 53119113 | + | 0.002472 | chr16:53118077-53121915 | Epigenome browser | Genome browser |
chr20 | 49340914 | 49341048 | + | 0.00068 | chr20:49340014-49343756 | Epigenome browser | Genome browser |
chr3 | 126714385 | 126714511 | - | 0.002038 | chr3:126712451-126723734 | Epigenome browser | Genome browser |
chr1 | 214686692 | 214686981 | + | 0.03165 | chr1:214686429-214688609 | Epigenome browser | Genome browser |
chr9 | 116705740 | 116705957 | - | 0.0001121 | chr9:116705157-116706129 | Epigenome browser | Genome browser |
chr20 | 47122257 | 47122355 | - | 0.002462 | chr20:47121386-47122328 | Epigenome browser | Genome browser |
chr9 | 134611061 | 134611370 | - | 0.04657 | chr9:134609164-134614762 | Epigenome browser | Genome browser |
chr3 | 197464725 | 197464757 | - | 0.02313 | chr3:197464062-197465081 | Epigenome browser | Genome browser |
chr14 | 75919225 | 75919404 | + | 0.000006941 | chr14:75918679-75921167 | Epigenome browser | Genome browser |
chr21 | 33847085 | 33847254 | - | 0.000005311 | chr21:33846207-33847737 | Epigenome browser | Genome browser |
chr9 | 124388016 | 124388196 | + | 0.0000003467 | chr9:124387738-124388691 | Epigenome browser | Genome browser |
chr20 | 47300111 | 47300398 | - | 0.005434 | chr20:47298971-47301764 | Epigenome browser | Genome browser |
chr5 | 179231798 | 179231881 | + | 0.002665 | chr5:179228744-179232587 | Epigenome browser | Genome browser |
chr9 | 71746594 | 71746709 | + | 0.03633 | chr9:71745269-71747559 | Epigenome browser | Genome browser |
chr3 | 72372878 | 72373200 | + | 0.0007695 | chr3:72372003-72373317 | Epigenome browser | Genome browser |
chr1 | 15237232 | 15237461 | - | 0.00005468 | chr1:15233246-15237785 | Epigenome browser | Genome browser |
chr10 | 37767491 | 37767568 | - | 0.0488 | chr10:37767118-37767735 | Epigenome browser | Genome browser |
chr6 | 82767863 | 82768208 | - | 0.01274 | chr6:82766497-82768147 | Epigenome browser | Genome browser |
chr21 | 35818678 | 35818801 | + | 0.009747 | chr21:35817852-35820552 | Epigenome browser | Genome browser |
chr5 | 179333781 | 179333875 | + | 0.0000002493 | chr5:179332999-179334449 | Epigenome browser | Genome browser |
chr1 | 31271215 | 31271281 | + | 0.03213 | chr1:31269882-31271927 | Epigenome browser | Genome browser |
chr21 | 35817784 | 35817892 | + | 0.02569 | chr21:35817852-35820552 | Epigenome browser | Genome browser |
chr9 | 136001730 | 136001958 | + | 0.002497 | chr9:136000299-136005766 | Epigenome browser | Genome browser |
chr4 | 6578652 | 6578819 | + | 0.00001768 | chr4:6577216-6579345 | Epigenome browser | Genome browser |
chr1 | 6561013 | 6561333 | + | 0.0000000276 | chr1:6560595-6563251 | Epigenome browser | Genome browser |
chr18 | 596590 | 596827 | + | 0.009142 | chr18:595940-596773 | Epigenome browser | Genome browser |
chr16 | 17327390 | 17327705 | + | 0.01036 | chr16:17326849-17327865 | Epigenome browser | Genome browser |
chr20 | 49482922 | 49483156 | - | 0.0002613 | chr20:49481478-49483786 | Epigenome browser | Genome browser |
chr19 | 18874405 | 18874480 | + | 0.01319 | chr19:18870779-18874991 | Epigenome browser | Genome browser |
chr19 | 18873674 | 18873756 | + | 0.001947 | chr19:18870779-18874991 | Epigenome browser | Genome browser |
chr3 | 150475350 | 150475485 | + | 0.0002388 | chr3:150475368-150476027 | Epigenome browser | Genome browser |
chr17 | 19153824 | 19154049 | + | 0.01628 | chr17:19153459-19155108 | Epigenome browser | Genome browser |
chr14 | 96511821 | 96512047 | - | 0.003785 | chr14:96511384-96513416 | Epigenome browser | Genome browser |
chr7 | 38237888 | 38238120 | - | 0.000401 | chr7:38237257-38238579 | Epigenome browser | Genome browser |
chr12 | 4417446 | 4417726 | + | 0.0000003012 | chr12:4417335-4418737 | Epigenome browser | Genome browser |
chr2 | 39345707 | 39345994 | - | 0.03653 | chr2:39344493-39346348 | Epigenome browser | Genome browser |
chr8 | 128823447 | 128823626 | - | 0.004107 | chr8:128820163-128825135 | Epigenome browser | Genome browser |
chr9 | 2119663 | 2119985 | + | 0.0000001525 | chr9:2119115-2122673 | Epigenome browser | Genome browser |
chr8 | 48273080 | 48273385 | - | 0.04301 | chr8:48273016-48274377 | Epigenome browser | Genome browser |
chr5 | 149894655 | 149895006 | - | 0.02127 | chr5:149894387-149896333 | Epigenome browser | Genome browser |
chr16 | 23307592 | 23307700 | - | 0.03087 | chr16:23306001-23308983 | Epigenome browser | Genome browser |
chr12 | 120788573 | 120788816 | + | 0.000003849 | chr12:120788376-120789484 | Epigenome browser | Genome browser |
chr16 | 11065911 | 11066155 | + | 0.000004738 | chr16:11065419-11066599 | Epigenome browser | Genome browser |
chr2 | 11125570 | 11125748 | - | 0.00882 | chr2:11124575-11126070 | Epigenome browser | Genome browser |
chr16 | 11282165 | 11282351 | + | 0.01597 | chr16:11282138-11284644 | Epigenome browser | Genome browser |
chr14 | 37529833 | 37529910 | - | 0.03864 | chr14:37529760-37531354 | Epigenome browser | Genome browser |
chr10 | 105216351 | 105216532 | - | 0.01693 | chr10:105215662-105217573 | Epigenome browser | Genome browser |
chr8 | 59680274 | 59680393 | + | 0.0118 | chr8:59680052-59681098 | Epigenome browser | Genome browser |
chr1 | 26221991 | 26222278 | - | 0.01389 | chr1:26222028-26223380 | Epigenome browser | Genome browser |
chr22 | 42356582 | 42356744 | + | 0.0474 | chr22:42355707-42357140 | Epigenome browser | Genome browser |
chr14 | 91764889 | 91765146 | + | 0.00002813 | chr14:91765140-91766527 | Epigenome browser | Genome browser |
chr11 | 18727144 | 18727251 | - | 0.004035 | chr11:18726312-18727524 | Epigenome browser | Genome browser |
chr10 | 73471413 | 73471602 | + | 0.000211 | chr10:73470289-73471635 | Epigenome browser | Genome browser |
chr17 | 43176053 | 43176314 | - | 0.0001315 | chr17:43174763-43177768 | Epigenome browser | Genome browser |
chr15 | 27710577 | 27710737 | + | 0.0007411 | chr15:27710614-27711259 | Epigenome browser | Genome browser |
chr6 | 5941381 | 5941612 | - | 0.0008333 | chr6:5940928-5942476 | Epigenome browser | Genome browser |
chr2 | 43563954 | 43564287 | - | 0.002311 | chr2:43563512-43564488 | Epigenome browser | Genome browser |
chr12 | 113259695 | 113259842 | - | 0.03364 | chr12:113259790-113260428 | Epigenome browser | Genome browser |
chr13 | 104291648 | 104292006 | - | 0.00001728 | chr13:104290996-104291828 | Epigenome browser | Genome browser |
chr20 | 47408272 | 47408530 | + | 0.000000007274 | chr20:47407122-47408809 | Epigenome browser | Genome browser |
chr1 | 57011670 | 57011803 | + | 0.006012 | chr1:57011431-57012224 | Epigenome browser | Genome browser |
chr11 | 110936702 | 110936989 | + | 0.001012 | chr11:110935863-110937225 | Epigenome browser | Genome browser |
chr18 | 24490385 | 24490675 | - | 0.003875 | chr18:24490230-24491158 | Epigenome browser | Genome browser |
chr16 | 21256351 | 21256668 | + | 0.0001385 | chr16:21255214-21257424 | Epigenome browser | Genome browser |
chr14 | 50699965 | 50700259 | + | 0.0005341 | chr14:50699571-50700601 | Epigenome browser | Genome browser |
chr6 | 43706608 | 43706672 | - | 0.001971 | chr6:43704321-43707241 | Epigenome browser | Genome browser |
chr9 | 71651967 | 71652057 | + | 0.000006698 | chr9:71651076-71652249 | Epigenome browser | Genome browser |
chr4 | 124572789 | 124573093 | - | 0.01409 | chr4:124572140-124573438 | Epigenome browser | Genome browser |
chr3 | 54479201 | 54479408 | - | 0.003155 | chr3:54477140-54479424 | Epigenome browser | Genome browser |
chr20 | 3749719 | 3749909 | + | 0.0001097 | chr20:3748893-3750923 | Epigenome browser | Genome browser |
chr19 | 31755435 | 31755702 | - | 0.000001261 | chr19:31754490-31755689 | Epigenome browser | Genome browser |
chr2 | 55203522 | 55203729 | - | 0.0231 | chr2:55202475-55203917 | Epigenome browser | Genome browser |
chr16 | 23259751 | 23260080 | + | 0.02074 | chr16:23255992-23260529 | Epigenome browser | Genome browser |
chr8 | 116419239 | 116419545 | + | 0.0246 | chr8:116418750-116420040 | Epigenome browser | Genome browser |
chr19 | 44104299 | 44104491 | + | 0.01633 | chr19:44103088-44104956 | Epigenome browser | Genome browser |
chr5 | 178700485 | 178700654 | + | 0.0003585 | chr5:178690251-178704363 | Epigenome browser | Genome browser |
chr1 | 31271303 | 31271527 | + | 0.000007703 | chr1:31269882-31271927 | Epigenome browser | Genome browser |
chr8 | 102301184 | 102301321 | - | 0.01267 | chr8:102299649-102301627 | Epigenome browser | Genome browser |
chr17 | 1013644 | 1013855 | - | 0.001313 | chr17:1012876-1015988 | Epigenome browser | Genome browser |
chr2 | 192695664 | 192695874 | + | 0.002427 | chr2:192695599-192696260 | Epigenome browser | Genome browser |
chr20 | 51065355 | 51065420 | + | 0.0005035 | chr20:51064976-51066247 | Epigenome browser | Genome browser |
chr10 | 63834844 | 63835136 | - | 0.001832 | chr10:63834521-63837159 | Epigenome browser | Genome browser |
chr12 | 130500146 | 130500251 | - | 0.000002528 | chr12:130499602-130502679 | Epigenome browser | Genome browser |
chr5 | 130651114 | 130651368 | - | 0.01917 | chr5:130650949-130651974 | Epigenome browser | Genome browser |
chr10 | 114529583 | 114529902 | - | 0.001366 | chr10:114529035-114530088 | Epigenome browser | Genome browser |
chr16 | 27562253 | 27562338 | - | 0.005791 | chr16:27561751-27562784 | Epigenome browser | Genome browser |
chr4 | 6958064 | 6958174 | - | 0.008845 | chr4:6955282-6958996 | Epigenome browser | Genome browser |
chr7 | 42454434 | 42454751 | - | 0.0000207 | chr7:42453857-42455352 | Epigenome browser | Genome browser |
chr20 | 48921367 | 48921648 | + | 0.00002224 | chr20:48919250-48924174 | Epigenome browser | Genome browser |
chr12 | 116848686 | 116848812 | - | 0.000001222 | chr12:116848525-116849316 | Epigenome browser | Genome browser |
chr3 | 61593441 | 61593781 | - | 0.01358 | chr3:61593422-61594565 | Epigenome browser | Genome browser |
chr12 | 131446282 | 131446535 | + | 0.00000000109 | chr12:131445920-131447318 | Epigenome browser | Genome browser |
chr18 | 20882743 | 20882933 | - | 0.04103 | chr18:20882636-20884067 | Epigenome browser | Genome browser |
chr13 | 29025968 | 29026282 | - | 0.000009261 | chr13:29025629-29026809 | Epigenome browser | Genome browser |
chr14 | 69126764 | 69126968 | - | 0.00004316 | chr14:69125104-69127195 | Epigenome browser | Genome browser |
chr3 | 65468941 | 65469049 | + | 0.00002888 | chr3:65468409-65472765 | Epigenome browser | Genome browser |
chr13 | 102296271 | 102296465 | + | 0.00000007407 | chr13:102295727-102296751 | Epigenome browser | Genome browser |
chr2 | 43713780 | 43714063 | - | 0.04273 | chr2:43713318-43714702 | Epigenome browser | Genome browser |
chr12 | 42721666 | 42721891 | - | 0.0382 | chr12:42720686-42722250 | Epigenome browser | Genome browser |
chr20 | 309530 | 309799 | - | 0.01331 | chr20:308067-312175 | Epigenome browser | Genome browser |
chr11 | 65361866 | 65362055 | - | 0.00005198 | chr11:65360398-65362146 | Epigenome browser | Genome browser |
chr3 | 12997410 | 12997709 | + | 0.0273 | chr3:12995388-12999941 | Epigenome browser | Genome browser |
chr5 | 178622387 | 178622634 | + | 0.0000004886 | chr5:178621403-178624015 | Epigenome browser | Genome browser |
chr20 | 48840119 | 48840426 | + | 0.00001365 | chr20:48840417-48842213 | Epigenome browser | Genome browser |
chr6 | 152594718 | 152595010 | + | 0.01226 | chr6:152593308-152595236 | Epigenome browser | Genome browser |
chr5 | 118788927 | 118789019 | - | 0.00119 | chr5:118788772-118790832 | Epigenome browser | Genome browser |
chr14 | 74235486 | 74235755 | + | 0.0008074 | chr14:74235405-74236217 | Epigenome browser | Genome browser |
chr20 | 52838717 | 52838925 | + | 0.007549 | chr20:52837960-52839626 | Epigenome browser | Genome browser |
chr2 | 198069313 | 198069477 | - | 0.0001181 | chr2:198069203-198069932 | Epigenome browser | Genome browser |
chr20 | 31046946 | 31047033 | - | 0.0000454 | chr20:31042123-31046985 | Epigenome browser | Genome browser |
chr19 | 1168065 | 1168172 | - | 0.0009532 | chr19:1163669-1168347 | Epigenome browser | Genome browser |
chr9 | 87438505 | 87438716 | - | 0.0000009721 | chr9:87438078-87440546 | Epigenome browser | Genome browser |
chr3 | 125733119 | 125733370 | + | 0.01661 | chr3:125732909-125733822 | Epigenome browser | Genome browser |
chr16 | 20914449 | 20914736 | + | 0.04032 | chr16:20912811-20918683 | Epigenome browser | Genome browser |
chr4 | 149135827 | 149136060 | - | 0.0001977 | chr4:149135785-149137031 | Epigenome browser | Genome browser |
chr3 | 197249987 | 197250178 | - | 0.003041 | chr3:197248861-197251297 | Epigenome browser | Genome browser |
chr15 | 78640706 | 78640804 | + | 0.004195 | chr15:78639398-78641270 | Epigenome browser | Genome browser |
chr15 | 75334239 | 75334489 | - | 0.005901 | chr15:75333439-75334610 | Epigenome browser | Genome browser |
chr18 | 33918192 | 33918443 | - | 0.01852 | chr18:33917968-33918838 | Epigenome browser | Genome browser |
chr1 | 14979803 | 14980163 | - | 0.00001224 | chr1:14979447-14982790 | Epigenome browser | Genome browser |
chr8 | 48297090 | 48297249 | + | 0.000001036 | chr8:48296817-48300921 | Epigenome browser | Genome browser |
chr1 | 153649803 | 153649908 | - | 0.01675 | chr1:153649812-153651236 | Epigenome browser | Genome browser |
chr2 | 25590468 | 25590634 | - | 0.009219 | chr2:25589945-25590878 | Epigenome browser | Genome browser |
chr16 | 81507345 | 81507527 | + | 0.0000001448 | chr16:81507261-81508756 | Epigenome browser | Genome browser |
chr16 | 23689512 | 23689573 | - | 0.00001085 | chr16:23689147-23690030 | Epigenome browser | Genome browser |
chr7 | 135514153 | 135514220 | + | 0.000249 | chr7:135513332-135514204 | Epigenome browser | Genome browser |
chr1 | 32647641 | 32647858 | - | 0.00001233 | chr1:32647690-32648900 | Epigenome browser | Genome browser |
chr14 | 75382280 | 75382541 | - | 0.000131 | chr14:75381569-75388133 | Epigenome browser | Genome browser |
chr12 | 67395244 | 67395571 | + | 0.01181 | chr12:67394118-67395708 | Epigenome browser | Genome browser |
chr3 | 57148228 | 57148424 | + | 0.001253 | chr3:57147695-57149664 | Epigenome browser | Genome browser |
chr4 | 6383831 | 6383961 | + | 0.03886 | chr4:6383863-6386107 | Epigenome browser | Genome browser |
chr9 | 96793659 | 96793816 | - | 0.01152 | chr9:96793526-96794927 | Epigenome browser | Genome browser |
chr4 | 673843 | 673931 | + | 0.0005205 | chr4:673664-675188 | Epigenome browser | Genome browser |
chr19 | 30154452 | 30154580 | - | 0.01849 | chr19:30153399-30156217 | Epigenome browser | Genome browser |
chr15 | 72020258 | 72020530 | - | 0.0331 | chr15:72020492-72023302 | Epigenome browser | Genome browser |
chr22 | 27816229 | 27816346 | + | 0.0003668 | chr22:27815997-27817947 | Epigenome browser | Genome browser |
chr9 | 80591643 | 80591881 | + | 0.002658 | chr9:80591065-80593802 | Epigenome browser | Genome browser |
chr3 | 4638707 | 4638994 | - | 0.01492 | chr3:4636591-4640389 | Epigenome browser | Genome browser |
chr20 | 49014923 | 49015267 | + | 0.0001867 | chr20:49014320-49017973 | Epigenome browser | Genome browser |
chr5 | 90457128 | 90457426 | - | 0.04033 | chr5:90457224-90458732 | Epigenome browser | Genome browser |
chr1 | 209222166 | 209222443 | + | 0.01598 | chr1:209222057-209222948 | Epigenome browser | Genome browser |
chr12 | 125248156 | 125248301 | + | 0.04113 | chr12:125245883-125248369 | Epigenome browser | Genome browser |
chr12 | 109900368 | 109900702 | - | 0.04032 | chr12:109896153-109903582 | Epigenome browser | Genome browser |
chr8 | 134846362 | 134846615 | - | 0.004143 | chr8:134845919-134847260 | Epigenome browser | Genome browser |
chr11 | 71781829 | 71781884 | - | 0.0007013 | chr11:71778794-71784650 | Epigenome browser | Genome browser |
chr5 | 169396663 | 169396707 | - | 0.01353 | chr5:169396643-169398071 | Epigenome browser | Genome browser |
chr16 | 30963045 | 30963297 | - | 0.002158 | chr16:30961088-30963743 | Epigenome browser | Genome browser |
chr12 | 125247817 | 125247862 | + | 0.02538 | chr12:125245883-125248369 | Epigenome browser | Genome browser |
chr13 | 76053011 | 76053289 | + | 0.0002387 | chr13:76051628-76053242 | Epigenome browser | Genome browser |
chr16 | 50572726 | 50573045 | + | 0.00007714 | chr16:50572003-50574659 | Epigenome browser | Genome browser |
chr2 | 172387048 | 172387308 | - | 0.005296 | chr2:172386775-172388266 | Epigenome browser | Genome browser |
chr10 | 35016089 | 35016201 | - | 0.01392 | chr10:35012294-35018024 | Epigenome browser | Genome browser |