Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
LTR7 | LTR | 2323 | 1.42E-05 | 3.498e-05 | H1ES |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
ERV1 | 945646 | 14618 | 0.03092 |
Found 70 LTR7 transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr10 | 20659775 | 20660223 | - | 0.00001654 | chr10:20660116-20660835 | Epigenome browser | Genome browser |
chr18 | 33429945 | 33430382 | + | 0.003986 | chr18:33429993-33430854 | Epigenome browser | Genome browser |
chr7 | 101578304 | 101578714 | + | 0.0008654 | chr7:101578606-101580939 | Epigenome browser | Genome browser |
chr2 | 79438472 | 79438883 | - | 0.003326 | chr2:79437798-79438484 | Epigenome browser | Genome browser |
chr1 | 114579697 | 114580147 | + | 0.00000006491 | chr1:114579124-114579734 | Epigenome browser | Genome browser |
chr8 | 838877 | 839287 | - | 0.01752 | chr8:838668-844485 | Epigenome browser | Genome browser |
chr4 | 182871135 | 182871570 | + | 0.0002217 | chr4:182870671-182871335 | Epigenome browser | Genome browser |
chr16 | 86775625 | 86776072 | - | 0.0000007059 | chr16:86774238-86775815 | Epigenome browser | Genome browser |
chr4 | 24502598 | 24503048 | + | 0.03801 | chr4:24501764-24502673 | Epigenome browser | Genome browser |
chr2 | 232434244 | 232434602 | + | 0.01452 | chr2:232432578-232434475 | Epigenome browser | Genome browser |
chr8 | 68632202 | 68632650 | - | 0.0000002396 | chr8:68632518-68633318 | Epigenome browser | Genome browser |
chr16 | 65268803 | 65269252 | - | 0.000002808 | chr16:65269096-65270244 | Epigenome browser | Genome browser |
chr7 | 7249362 | 7249781 | - | 0.0001238 | chr7:7248815-7249552 | Epigenome browser | Genome browser |
chr19 | 47901573 | 47902013 | + | 0.02091 | chr19:47901717-47903178 | Epigenome browser | Genome browser |
chr20 | 31562447 | 31562843 | + | 0.003605 | chr20:31561719-31562883 | Epigenome browser | Genome browser |
chr2 | 70853141 | 70853541 | + | 0.02228 | chr2:70853435-70854355 | Epigenome browser | Genome browser |
chr5 | 147249399 | 147249849 | - | 0.0006787 | chr5:147248689-147249426 | Epigenome browser | Genome browser |
chr4 | 69271612 | 69272013 | + | 0.000005529 | chr4:69270398-69271784 | Epigenome browser | Genome browser |
chr3 | 124546501 | 124546960 | + | 0.0000951 | chr3:124546516-124547934 | Epigenome browser | Genome browser |
chr19 | 55523384 | 55523791 | - | 0.005258 | chr19:55523697-55524772 | Epigenome browser | Genome browser |
chr2 | 198452083 | 198452450 | + | 0.0001396 | chr2:198452296-198453997 | Epigenome browser | Genome browser |
chr9 | 90022984 | 90023387 | - | 0.0004878 | chr9:90022363-90023365 | Epigenome browser | Genome browser |
chr10 | 96990950 | 96991400 | + | 0.000002557 | chr10:96990094-96992231 | Epigenome browser | Genome browser |
chr3 | 148914596 | 148915046 | + | 0.0006539 | chr3:148914897-148916204 | Epigenome browser | Genome browser |
chr6 | 3167270 | 3167538 | + | 0.001136 | chr6:3166854-3167583 | Epigenome browser | Genome browser |
chr1 | 213087542 | 213088023 | + | 0.002431 | chr1:213087887-213091013 | Epigenome browser | Genome browser |
chr5 | 157372262 | 157372712 | + | 0.006928 | chr5:157372609-157373079 | Epigenome browser | Genome browser |
chr4 | 140079130 | 140079526 | - | 0.00001242 | chr4:140078314-140079324 | Epigenome browser | Genome browser |
chr12 | 4132412 | 4132860 | + | 0.0009445 | chr12:4132691-4133902 | Epigenome browser | Genome browser |
chr17 | 58462333 | 58462765 | + | 0.00006117 | chr17:58462639-58463195 | Epigenome browser | Genome browser |
chr8 | 1749464 | 1749913 | + | 0.0003846 | chr8:1749446-1750389 | Epigenome browser | Genome browser |
chr6 | 126028460 | 126028909 | - | 0.001701 | chr6:126028738-126029663 | Epigenome browser | Genome browser |
chr13 | 111138949 | 111139345 | - | 0.009961 | chr13:111136473-111139064 | Epigenome browser | Genome browser |
chr2 | 207676901 | 207677351 | - | 0.00008424 | chr2:207677173-207677801 | Epigenome browser | Genome browser |
chr17 | 55094485 | 55094887 | + | 0.03229 | chr17:55094783-55095947 | Epigenome browser | Genome browser |
chr8 | 49174281 | 49174689 | - | 0.02074 | chr8:49172481-49174516 | Epigenome browser | Genome browser |
chr5 | 106314289 | 106314739 | + | 0.000000009569 | chr5:106313493-106314339 | Epigenome browser | Genome browser |
chr2 | 38307944 | 38308343 | - | 0.008446 | chr2:38307033-38307958 | Epigenome browser | Genome browser |
chr10 | 5518568 | 5518975 | + | 0.000001062 | chr10:5518818-5520518 | Epigenome browser | Genome browser |
chr15 | 62588670 | 62589066 | + | 0.0007601 | chr15:62587842-62588671 | Epigenome browser | Genome browser |
chr8 | 76129311 | 76129709 | - | 0.00001137 | chr8:76129510-76131119 | Epigenome browser | Genome browser |
chr13 | 51748692 | 51749142 | + | 0.01938 | chr13:51748963-51750184 | Epigenome browser | Genome browser |
chrX | 8657746 | 8657808 | - | 0.006412 | chrX:8657794-8658368 | Epigenome browser | Genome browser |
chr1 | 238542739 | 238543188 | - | 0.00006864 | chr1:238543162-238543774 | Epigenome browser | Genome browser |
chr3 | 186898601 | 186899050 | - | 0.006872 | chr3:186898965-186899909 | Epigenome browser | Genome browser |
chr1 | 223197738 | 223198189 | - | 0.003891 | chr1:223195207-223198036 | Epigenome browser | Genome browser |
chr15 | 101618044 | 101618498 | + | 0.000001254 | chr15:101618340-101620290 | Epigenome browser | Genome browser |
chr10 | 96988898 | 96989296 | + | 0.00006206 | chr10:96989188-96990030 | Epigenome browser | Genome browser |
chr3 | 32502431 | 32502860 | - | 0.03866 | chr3:32500589-32502683 | Epigenome browser | Genome browser |
chr21 | 38964399 | 38964810 | - | 0.000005688 | chr21:38964526-38965477 | Epigenome browser | Genome browser |
chr18 | 54731880 | 54732330 | - | 0.0137 | chr18:54731418-54732010 | Epigenome browser | Genome browser |
chr4 | 92189698 | 92190108 | - | 0.00007516 | chr4:92189988-92190770 | Epigenome browser | Genome browser |
chr4 | 187168371 | 187168738 | - | 0.000006457 | chr4:187168571-187169740 | Epigenome browser | Genome browser |
chr12 | 66891557 | 66892006 | + | 0.000002042 | chr12:66891827-66892546 | Epigenome browser | Genome browser |
chr5 | 118287978 | 118288341 | - | 0.00008999 | chr5:118288204-118289044 | Epigenome browser | Genome browser |
chr4 | 24507923 | 24508373 | + | 0.003949 | chr4:24508219-24510179 | Epigenome browser | Genome browser |
chr7 | 22748523 | 22748932 | + | 0.0002017 | chr7:22748844-22749527 | Epigenome browser | Genome browser |
chr4 | 88842955 | 88843404 | + | 0.0000004938 | chr4:88841134-88843081 | Epigenome browser | Genome browser |
chr9 | 88081411 | 88081859 | + | 0.0233 | chr9:88081720-88082356 | Epigenome browser | Genome browser |
chr19 | 54334658 | 54335108 | + | 0.02813 | chr19:54334022-54334781 | Epigenome browser | Genome browser |
chr8 | 72582322 | 72582683 | + | 0.0021 | chr8:72582491-72583420 | Epigenome browser | Genome browser |
chr4 | 14171572 | 14172023 | - | 0.0005042 | chr4:14170769-14171745 | Epigenome browser | Genome browser |
chr10 | 92572567 | 92573015 | + | 0.0007915 | chr10:92572875-92573485 | Epigenome browser | Genome browser |
chr18 | 65298243 | 65298699 | - | 0.0007627 | chr18:65298199-65298980 | Epigenome browser | Genome browser |
chr19 | 35558657 | 35559023 | - | 0.01114 | chr19:35559000-35560012 | Epigenome browser | Genome browser |
chr12 | 87338092 | 87338532 | + | 0.02067 | chr12:87338392-87339912 | Epigenome browser | Genome browser |
chr1 | 246976516 | 246976910 | + | 0.00009018 | chr1:246975710-246976671 | Epigenome browser | Genome browser |
chr10 | 46066622 | 46067016 | + | 0.04017 | chr10:46066605-46067211 | Epigenome browser | Genome browser |
chr9 | 102902464 | 102902872 | - | 0.001159 | chr9:102901853-102902669 | Epigenome browser | Genome browser |
chr1 | 12773732 | 12774140 | + | 0.01227 | chr1:12774022-12775220 | Epigenome browser | Genome browser |