Transposable elements methylation details:

Transposable ElementsClassCopy Numberp-value by RAPp-value by uniquely readsHypomethylated in
LTR62LTR3153.77E-053.839e-06Breast

TE Information :

FamilyTotal baseCpG countCpG content
ERVL13390612820.01915

Found 11 LTR62 transposable elements were hypo-methylated:

ChromosomeStartEndStrandANOVA pvalueDetected H3K4me1 peaksEpigenome browser linkGenome browser link
chr11130048288130048342-0.00000004251chr11:130047857-130050547Epigenome browserGenome browser
chr11130047792130048289-0.00000000474chr11:130047857-130050547Epigenome browserGenome browser
chr3141030887141031577-0.00000001872chr3:141030846-141032281Epigenome browserGenome browser
chr7157104066157104150+0.03151chr7:157103594-157104409Epigenome browserGenome browser
chr1287492278749937+0.00632chr12:8749770-8750346Epigenome browserGenome browser
chr149173548391735562+0.009932chr14:91735399-91736606Epigenome browserGenome browser
chr158954515889545376-0.03724chr15:89544513-89546762Epigenome browserGenome browser
chr7157103737157103780+0.01564chr7:157103594-157104409Epigenome browserGenome browser
chr171732119117321863+0.00138chr17:17321622-17323867Epigenome browserGenome browser
chr4185571150185571764-0.0001105chr4:185570854-185572123Epigenome browserGenome browser
chr881723208172989+0.0489chr8:8172546-8173300Epigenome browserGenome browser