Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| LTR43-int | LTR | 84 | 2.14E-08 | 1.144e-06 | Breast |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| ERV1 | 82557 | 744 | 0.01802 |
Found 1 LTR43-int transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr8 | 144129482 | 144129882 | + | 0.0000992 | chr8:144128688-144129740 | Epigenome browser | Genome browser |