Transposable elements methylation details:

Transposable ElementsClassCopy Numberp-value by RAPp-value by uniquely readsHypomethylated in
LTR42LTR2884.04E-102.147e-13Breast

TE Information :

FamilyTotal baseCpG countCpG content
ERVL10995910450.01901

Found 24 LTR42 transposable elements were hypo-methylated:

ChromosomeStartEndStrandANOVA pvalueDetected H3K4me1 peaksEpigenome browser linkGenome browser link
chr1947080464708505+0.0000000006208chr19:4703671-4714979Epigenome browserGenome browser
chr1191497518191497835+0.0000005173chr1:191497120-191497704Epigenome browserGenome browser
chr1228292057228292545+0.000004149chr1:228291212-228292671Epigenome browserGenome browser
chr48725923887259714+0.001759chr4:87258902-87260114Epigenome browserGenome browser
chr1227924523227924855-0.000000002961chr1:227923583-227924612Epigenome browserGenome browser
chr9138157034138157295+0.0003617chr9:138156447-138158088Epigenome browserGenome browser
chr214671094346711375-0.00000801chr21:46711037-46711645Epigenome browserGenome browser
chr12104575983104576464+0.0000000001244chr12:104574026-104576779Epigenome browserGenome browser
chr9131266175131266510-0.0000004515chr9:131265748-131266487Epigenome browserGenome browser
chr6170851460170851885+0.00006257chr6:170851341-170852371Epigenome browserGenome browser
chr9131265854131265888-0.00001936chr9:131265748-131266487Epigenome browserGenome browser
chr35241478952415106-0.006261chr3:52412916-52415107Epigenome browserGenome browser
chr206233710562337555+0.01344chr20:62336114-62338160Epigenome browserGenome browser
chr174312247743122607-0.001034chr17:43114874-43124712Epigenome browserGenome browser
chr1227924076227924208-0.0155chr1:227923583-227924612Epigenome browserGenome browser
chr193580048335800661-0.0000004465chr19:35799758-35801174Epigenome browserGenome browser
chr143990297039903005+0.0001104chr14:39902661-39903275Epigenome browserGenome browser
chr125306690553067420-0.000001785chr12:53065998-53069061Epigenome browserGenome browser
chr38622408186224562+0.001313chr3:86224071-86224743Epigenome browserGenome browser
chr6158800299158800802-0.008915chr6:158792493-158802511Epigenome browserGenome browser
chr2129503920129504277-0.01615chr2:129503524-129504636Epigenome browserGenome browser
chr214076209840762574-0.0000006796chr21:40759992-40762899Epigenome browserGenome browser
chr32403538324035892-0.00001375chr3:24034889-24036033Epigenome browserGenome browser
chr193580004435800365-0.000579chr19:35799758-35801174Epigenome browserGenome browser