Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| LTR38C | LTR | 123 | 1.75E-06 | 1.735e-05 | Breast |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| ERV1 | 49399 | 478 | 0.01935 |
Found 1 LTR38C transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr14 | 45680204 | 45680862 | + | 0.003496 | chr14:45679936-45681723 | Epigenome browser | Genome browser |