Transposable elements methylation details:
| Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
|---|---|---|---|---|---|
| LTR35 | LTR | 117 | 1.01E-07 | 7.468e-08 | H1ES |
TE Information :
| Family | Total base | CpG count | CpG content |
|---|---|---|---|
| ERV1 | 40564 | 391 | 0.01928 |
Found 2 LTR35 transposable elements were hypo-methylated:
| Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
|---|---|---|---|---|---|---|---|
| chr7 | 105329011 | 105329162 | + | 0.002609 | chr7:105327968-105329188 | Epigenome browser | Genome browser |
| chr6 | 17679886 | 17680474 | + | 0.00172 | chr6:17679866-17680763 | Epigenome browser | Genome browser |