Transposable elements methylation details:

Transposable ElementsClassCopy Numberp-value by RAPp-value by uniquely readsHypomethylated in
LTR22ALTR1897.68E-085.227e-09Breast

TE Information :

FamilyTotal baseCpG countCpG content
ERVK763459330.02444

Found 10 LTR22A transposable elements were hypo-methylated:

ChromosomeStartEndStrandANOVA pvalueDetected H3K4me1 peaksEpigenome browser linkGenome browser link
chr116736098067361444+0.00001733chr11:67360136-67362024Epigenome browserGenome browser
chr178025351980253842+0.000113chr17:80253830-80255354Epigenome browserGenome browser
chr166641283466413199+0.00000884chr16:66412526-66413665Epigenome browserGenome browser
chr185227422052274680-0.00007852chr18:52273990-52274922Epigenome browserGenome browser
chr12621679026217243+0.00000498chr1:26215975-26218806Epigenome browserGenome browser
chr168741284587413294+0.0009487chr16:87412718-87413525Epigenome browserGenome browser
chr45961544159615777-0.00002443chr4:59614989-59615743Epigenome browserGenome browser
chr1193365242193365405-0.000000413chr1:193365292-193366333Epigenome browserGenome browser
chr178025414280254276+0.02618chr17:80253830-80255354Epigenome browserGenome browser
chr1203398281203398710-0.000000009746chr1:203397335-203398674Epigenome browserGenome browser