Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
LTR10B1 | LTR | 238 | 3.10E-09 | 2.495e-09 | H1ES |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
ERV1 | 79058 | 934 | 0.02363 |
Found 1 LTR10B1 transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr16 | 30108197 | 30108528 | + | 0.001023 | chr16:30107665-30108284 | Epigenome browser | Genome browser |