Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
L2 | LINE | 56035 | 4.44E-06 | 2.231e-07 | H1ES |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
L2 | 15501011 | 95009 | 0.01226 |
Found 110 L2 transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr7 | 128507915 | 128508006 | - | 0.03425 | chr7:128507602-128509253 | Epigenome browser | Genome browser |
chr9 | 36292628 | 36292761 | + | 0.04065 | chr9:36292615-36293226 | Epigenome browser | Genome browser |
chr6 | 41932544 | 41932777 | - | 0.04026 | chr6:41931884-41933624 | Epigenome browser | Genome browser |
chrX | 150527745 | 150528199 | + | 0.02804 | chrX:150527614-150528287 | Epigenome browser | Genome browser |
chr1 | 233434700 | 233435133 | + | 0.03292 | chr1:233435040-233435741 | Epigenome browser | Genome browser |
chr5 | 16974367 | 16974657 | + | 0.0003529 | chr5:16973846-16974456 | Epigenome browser | Genome browser |
chr9 | 130131415 | 130132250 | - | 0.01293 | chr9:130132096-130132679 | Epigenome browser | Genome browser |
chr1 | 107528043 | 107528705 | - | 0.00307 | chr1:107527509-107528099 | Epigenome browser | Genome browser |
chr19 | 41696179 | 41696254 | - | 0.004573 | chr19:41695423-41696211 | Epigenome browser | Genome browser |
chr6 | 138481757 | 138482234 | + | 0.01678 | chr6:138482041-138482815 | Epigenome browser | Genome browser |
chr22 | 44542944 | 44543356 | - | 0.00245 | chr22:44540698-44545602 | Epigenome browser | Genome browser |
chr14 | 95465534 | 95465600 | - | 0.03881 | chr14:95464322-95465670 | Epigenome browser | Genome browser |
chr1 | 16862339 | 16862499 | + | 0.003311 | chr1:16860464-16863618 | Epigenome browser | Genome browser |
chr7 | 138658150 | 138658379 | + | 0.03057 | chr7:138657667-138658994 | Epigenome browser | Genome browser |
chr17 | 7580077 | 7580255 | + | 0.01019 | chr17:7579165-7580567 | Epigenome browser | Genome browser |
chr1 | 47657396 | 47658106 | - | 0.03197 | chr1:47657956-47659527 | Epigenome browser | Genome browser |
chr19 | 45259203 | 45259396 | - | 0.003172 | chr19:45259374-45260101 | Epigenome browser | Genome browser |
chr11 | 126365721 | 126365878 | + | 0.004418 | chr11:126364526-126365985 | Epigenome browser | Genome browser |
chr11 | 75292604 | 75292905 | + | 0.0264 | chr11:75292900-75294417 | Epigenome browser | Genome browser |
chr10 | 5505322 | 5505957 | + | 0.01575 | chr10:5504789-5505455 | Epigenome browser | Genome browser |
chr1 | 223261653 | 223262294 | + | 0.004488 | chr1:223262144-223262672 | Epigenome browser | Genome browser |
chr1 | 225727185 | 225727523 | + | 0.009153 | chr1:225725921-225727253 | Epigenome browser | Genome browser |
chr20 | 47414789 | 47415147 | + | 0.004951 | chr20:47414852-47415433 | Epigenome browser | Genome browser |
chr15 | 76478896 | 76479287 | + | 0.03399 | chr15:76478226-76478909 | Epigenome browser | Genome browser |
chr13 | 36432043 | 36432469 | - | 0.00088 | chr13:36432389-36433217 | Epigenome browser | Genome browser |
chr12 | 20252056 | 20252417 | - | 0.04156 | chr12:20252040-20252858 | Epigenome browser | Genome browser |
chrX | 68353080 | 68354091 | + | 0.004453 | chrX:68352328-68353200 | Epigenome browser | Genome browser |
chr12 | 11936059 | 11936699 | - | 0.01806 | chr12:11936565-11937310 | Epigenome browser | Genome browser |
chr7 | 55622279 | 55622637 | - | 0.03457 | chr7:55622253-55623458 | Epigenome browser | Genome browser |
chr6 | 35710531 | 35710601 | + | 0.03183 | chr6:35710262-35711403 | Epigenome browser | Genome browser |
chr20 | 52214814 | 52215099 | - | 0.03829 | chr20:52214922-52215693 | Epigenome browser | Genome browser |
chr15 | 81227187 | 81227588 | - | 0.01872 | chr15:81226859-81227603 | Epigenome browser | Genome browser |
chr4 | 57305784 | 57305810 | + | 0.03027 | chr4:57305783-57306203 | Epigenome browser | Genome browser |
chr5 | 118415400 | 118415776 | + | 0.001977 | chr5:118415555-118416933 | Epigenome browser | Genome browser |
chr18 | 11961075 | 11961133 | - | 0.02179 | chr18:11960813-11961358 | Epigenome browser | Genome browser |
chr3 | 129310585 | 129310950 | + | 0.02902 | chr3:129309893-129311508 | Epigenome browser | Genome browser |
chr11 | 113733086 | 113733198 | - | 0.006597 | chr11:113732622-113733177 | Epigenome browser | Genome browser |
chr20 | 55691930 | 55692061 | + | 0.001509 | chr20:55691982-55692837 | Epigenome browser | Genome browser |
chr4 | 7898681 | 7898876 | + | 0.04875 | chr4:7897837-7899083 | Epigenome browser | Genome browser |
chr21 | 35023531 | 35023670 | - | 0.006805 | chr21:35022935-35023629 | Epigenome browser | Genome browser |
chr2 | 10168440 | 10168632 | + | 0.007697 | chr2:10168225-10170303 | Epigenome browser | Genome browser |
chr10 | 73424972 | 73425188 | + | 0.02433 | chr10:73423775-73426046 | Epigenome browser | Genome browser |
chr4 | 36646034 | 36646291 | + | 0.007217 | chr4:36645796-36646391 | Epigenome browser | Genome browser |
chr10 | 80090886 | 80091196 | - | 0.02338 | chr10:80091133-80091745 | Epigenome browser | Genome browser |
chr16 | 49655865 | 49655945 | + | 0.00988 | chr16:49654100-49655878 | Epigenome browser | Genome browser |
chr10 | 3316678 | 3316970 | - | 0.04848 | chr10:3315880-3316977 | Epigenome browser | Genome browser |
chr6 | 107062201 | 107062724 | - | 0.01533 | chr6:107061388-107062592 | Epigenome browser | Genome browser |
chr15 | 30213336 | 30213526 | + | 0.03894 | chr15:30212463-30214247 | Epigenome browser | Genome browser |
chr7 | 101374729 | 101374854 | + | 0.003804 | chr7:101374712-101375682 | Epigenome browser | Genome browser |
chr18 | 8959726 | 8959872 | - | 0.02229 | chr18:8958749-8960542 | Epigenome browser | Genome browser |
chr10 | 2500092 | 2500284 | - | 0.01385 | chr10:2499587-2500112 | Epigenome browser | Genome browser |
chr8 | 38370071 | 38370178 | - | 0.04673 | chr8:38370135-38371146 | Epigenome browser | Genome browser |
chr4 | 76437227 | 76438105 | + | 0.0002966 | chr4:76436568-76437418 | Epigenome browser | Genome browser |
chr8 | 68632651 | 68632854 | - | 0.002518 | chr8:68632518-68633318 | Epigenome browser | Genome browser |
chr7 | 26814815 | 26814948 | + | 0.01756 | chr7:26814240-26814819 | Epigenome browser | Genome browser |
chr15 | 38555342 | 38555797 | - | 0.0001977 | chr15:38555370-38556015 | Epigenome browser | Genome browser |
chr5 | 109040566 | 109040860 | + | 0.00763 | chr5:109039738-109040567 | Epigenome browser | Genome browser |
chr8 | 28938436 | 28938554 | + | 0.002053 | chr8:28937974-28939102 | Epigenome browser | Genome browser |
chr15 | 79104679 | 79105065 | + | 0.01783 | chr15:79104010-79105059 | Epigenome browser | Genome browser |
chr3 | 57796216 | 57796783 | + | 0.0386 | chr3:57794320-57796265 | Epigenome browser | Genome browser |
chr22 | 43319268 | 43319426 | + | 0.04963 | chr22:43318098-43319443 | Epigenome browser | Genome browser |
chr11 | 94471724 | 94472300 | - | 0.008953 | chr11:94472165-94473327 | Epigenome browser | Genome browser |
chr14 | 68551597 | 68552497 | - | 0.005503 | chr14:68552159-68553312 | Epigenome browser | Genome browser |
chr13 | 27820043 | 27820604 | - | 0.01742 | chr13:27820188-27821198 | Epigenome browser | Genome browser |
chr11 | 30473641 | 30473826 | + | 0.01739 | chr11:30473182-30474398 | Epigenome browser | Genome browser |
chr12 | 44975923 | 44976527 | - | 0.0009763 | chr12:44975839-44976533 | Epigenome browser | Genome browser |
chr10 | 129531718 | 129532099 | - | 0.03878 | chr10:129531909-129532527 | Epigenome browser | Genome browser |
chr7 | 121597569 | 121597663 | + | 0.03364 | chr7:121597232-121597909 | Epigenome browser | Genome browser |
chrX | 152126769 | 152126882 | - | 0.005711 | chrX:152126721-152127516 | Epigenome browser | Genome browser |
chr17 | 7034666 | 7034984 | - | 0.00002057 | chr17:7033613-7035191 | Epigenome browser | Genome browser |
chr18 | 10053996 | 10054490 | - | 0.04254 | chr18:10053894-10055408 | Epigenome browser | Genome browser |
chr9 | 140564615 | 140564799 | + | 0.03848 | chr9:140563274-140565902 | Epigenome browser | Genome browser |
chr6 | 139299884 | 139300037 | + | 0.003106 | chr6:139299650-139300532 | Epigenome browser | Genome browser |
chr22 | 47387486 | 47387556 | + | 0.008173 | chr22:47387048-47388357 | Epigenome browser | Genome browser |
chr6 | 43893994 | 43894102 | - | 0.02459 | chr6:43893826-43895063 | Epigenome browser | Genome browser |
chr2 | 129248353 | 129248558 | + | 0.0301 | chr2:129247836-129249547 | Epigenome browser | Genome browser |
chr15 | 78401006 | 78401089 | + | 0.0182 | chr15:78400681-78401634 | Epigenome browser | Genome browser |
chr6 | 101950905 | 101951249 | - | 0.04133 | chr6:101950706-101951249 | Epigenome browser | Genome browser |
chr6 | 39916906 | 39917306 | + | 0.002023 | chr6:39915919-39917012 | Epigenome browser | Genome browser |
chr16 | 86459554 | 86459776 | + | 0.03831 | chr16:86459617-86460336 | Epigenome browser | Genome browser |
chr21 | 43511657 | 43512106 | - | 0.00446 | chr21:43511266-43512558 | Epigenome browser | Genome browser |
chr1 | 17198424 | 17198584 | - | 0.006157 | chr1:17197337-17198482 | Epigenome browser | Genome browser |
chr21 | 44499587 | 44499747 | - | 0.0009003 | chr21:44499423-44501001 | Epigenome browser | Genome browser |
chr1 | 178510354 | 178510849 | + | 0.007271 | chr1:178510391-178511495 | Epigenome browser | Genome browser |
chr1 | 44961853 | 44962080 | - | 0.01755 | chr1:44961893-44962788 | Epigenome browser | Genome browser |
chr9 | 100854667 | 100854727 | + | 0.04241 | chr9:100854348-100855036 | Epigenome browser | Genome browser |
chr2 | 170941858 | 170942291 | - | 0.00214 | chr2:170940246-170942551 | Epigenome browser | Genome browser |
chr15 | 97604974 | 97605123 | + | 0.01371 | chr15:97604386-97605233 | Epigenome browser | Genome browser |
chr3 | 184276080 | 184276327 | + | 0.000516 | chr3:184275866-184276559 | Epigenome browser | Genome browser |
chr1 | 248008256 | 248009227 | + | 0.01918 | chr1:248008311-248009078 | Epigenome browser | Genome browser |
chr12 | 127631990 | 127632185 | + | 0.01027 | chr12:127631651-127632533 | Epigenome browser | Genome browser |
chr2 | 188128051 | 188129038 | - | 0.00006342 | chr2:188128485-188129216 | Epigenome browser | Genome browser |
chr3 | 195424365 | 195425795 | + | 0.0491 | chr3:195423347-195424568 | Epigenome browser | Genome browser |
chrX | 68088321 | 68088883 | - | 0.0002066 | chrX:68087004-68088335 | Epigenome browser | Genome browser |
chr15 | 34136480 | 34136652 | - | 0.002245 | chr15:34136421-34137115 | Epigenome browser | Genome browser |
chr1 | 110179356 | 110179454 | - | 0.04248 | chr1:110178903-110179857 | Epigenome browser | Genome browser |
chr10 | 88149809 | 88150323 | - | 0.004555 | chr10:88149532-88150080 | Epigenome browser | Genome browser |
chr19 | 54617383 | 54617467 | - | 0.0146 | chr19:54617451-54618474 | Epigenome browser | Genome browser |
chr12 | 25057549 | 25057625 | + | 0.04818 | chr12:25056909-25057552 | Epigenome browser | Genome browser |
chr11 | 78306340 | 78306498 | - | 0.02032 | chr11:78305313-78307046 | Epigenome browser | Genome browser |
chr7 | 128508059 | 128508317 | - | 0.02743 | chr7:128507602-128509253 | Epigenome browser | Genome browser |
chr2 | 231726124 | 231726505 | - | 0.01488 | chr2:231725597-231727599 | Epigenome browser | Genome browser |
chr12 | 46654296 | 46654632 | + | 0.008336 | chr12:46653983-46655068 | Epigenome browser | Genome browser |
chrX | 133047170 | 133047529 | - | 0.04405 | chrX:133047368-133048021 | Epigenome browser | Genome browser |
chr8 | 30250378 | 30250491 | - | 0.03 | chr8:30249618-30250522 | Epigenome browser | Genome browser |
chr2 | 20551696 | 20552155 | + | 0.04698 | chr2:20550802-20552387 | Epigenome browser | Genome browser |
chr19 | 55904429 | 55904711 | + | 0.008855 | chr19:55902484-55904725 | Epigenome browser | Genome browser |
chr21 | 43932436 | 43932625 | - | 0.03081 | chr21:43932434-43933798 | Epigenome browser | Genome browser |
chr1 | 15513146 | 15513383 | - | 0.02276 | chr1:15512931-15515379 | Epigenome browser | Genome browser |
chr15 | 58957938 | 58958685 | + | 0.009863 | chr15:58958500-58959072 | Epigenome browser | Genome browser |