Transposable elements methylation details:

Transposable ElementsClassCopy Numberp-value by RAPp-value by uniquely readsHypomethylated in
HERV15-intLTR881.13E-105.062e-13Breast

TE Information :

FamilyTotal baseCpG countCpG content
ERV115793915970.02022

Found 16 HERV15-int transposable elements were hypo-methylated:

ChromosomeStartEndStrandANOVA pvalueDetected H3K4me1 peaksEpigenome browser linkGenome browser link
chr121051641110518019+0.00000001834chr12:10517812-10520475Epigenome browserGenome browser
chr121051801010518666+0.01255chr12:10517812-10520475Epigenome browserGenome browser
chr33300955933010466+0.01303chr3:33008863-33010745Epigenome browserGenome browser
chrX119221041119222173-0.00005849chrX:119221123-119221890Epigenome browserGenome browser
chr162068593120687566+0.00000004428chr16:20687413-20690225Epigenome browserGenome browser
chr162068821720688803+0.04065chr16:20687413-20690225Epigenome browserGenome browser
chr162068755920688242+0.002247chr16:20687413-20690225Epigenome browserGenome browser
chr22652433226527312+0.00000191chr2:26523080-26526641Epigenome browserGenome browser
chr22652289226524331+0.02943chr2:26523080-26526641Epigenome browserGenome browser
chr121051921310520044+0.01017chr12:10517812-10520475Epigenome browserGenome browser
chr75010755350108622-0.0000001673chr7:50107213-50108513Epigenome browserGenome browser
chr121051864010519219+0.0004208chr12:10517812-10520475Epigenome browserGenome browser
chr33300919633009566+0.0000004292chr3:33008863-33010745Epigenome browserGenome browser
chrX4916608549166404+0.01012chrX:49165000-49166254Epigenome browserGenome browser
chr75010861350110182-0.0004661chr7:50109068-50109984Epigenome browserGenome browser
chr192178613521788299+0.000006342chr19:21785816-21788639Epigenome browserGenome browser