Transposable elements methylation details:
Transposable Elements | Class | Copy Number | p-value by RAP | p-value by uniquely reads | Hypomethylated in |
---|---|---|---|---|---|
AluSg4 | SINE | 7364 | 1.75E-05 | 0.01001 | Blood |
TE Information :
Family | Total base | CpG count | CpG content |
---|---|---|---|
Alu | 2109666 | 57053 | 0.05409 |
Found 149 AluSg4 transposable elements were hypo-methylated:
Chromosome | Start | End | Strand | ANOVA pvalue | Detected H3K4me1 peaks | Epigenome browser link | Genome browser link |
---|---|---|---|---|---|---|---|
chr7 | 157282976 | 157283274 | - | 0.0002856 | chr7:157281616-157284782 | Epigenome browser | Genome browser |
chr15 | 85301201 | 85301503 | - | 0.02231 | chr15:85301296-85308842 | Epigenome browser | Genome browser |
chr13 | 100196324 | 100196614 | + | 0.03009 | chr13:100191142-100197438 | Epigenome browser | Genome browser |
chr7 | 150711689 | 150711993 | - | 0.0002715 | chr7:150703397-150715888 | Epigenome browser | Genome browser |
chr1 | 113172956 | 113173264 | - | 0.01546 | chr1:113162748-113182584 | Epigenome browser | Genome browser |
chr5 | 112206587 | 112206804 | - | 0.006527 | chr5:112204665-112206608 | Epigenome browser | Genome browser |
chr12 | 15724216 | 15724519 | - | 0.00001624 | chr12:15722716-15725434 | Epigenome browser | Genome browser |
chr13 | 48724917 | 48725213 | + | 0.0283 | chr13:48723787-48731764 | Epigenome browser | Genome browser |
chr5 | 171544737 | 171545035 | + | 0.00005056 | chr5:171533258-171548700 | Epigenome browser | Genome browser |
chr21 | 38597005 | 38597292 | + | 0.0001117 | chr21:38595165-38599155 | Epigenome browser | Genome browser |
chr15 | 85176088 | 85176392 | - | 0.03466 | chr15:85174613-85176892 | Epigenome browser | Genome browser |
chr7 | 72943029 | 72943341 | - | 0.01047 | chr7:72938653-72943369 | Epigenome browser | Genome browser |
chr5 | 138950712 | 138951012 | + | 0.001382 | chr5:138941752-138952662 | Epigenome browser | Genome browser |
chr20 | 5583658 | 5583947 | + | 0.005529 | chr20:5582078-5590826 | Epigenome browser | Genome browser |
chr14 | 23358225 | 23358532 | + | 0.000009118 | chr14:23356186-23360307 | Epigenome browser | Genome browser |
chr1 | 179922398 | 179922706 | - | 0.01622 | chr1:179921242-179923842 | Epigenome browser | Genome browser |
chr11 | 32609655 | 32609961 | + | 0.000001938 | chr11:32606145-32611186 | Epigenome browser | Genome browser |
chr7 | 151213429 | 151213734 | + | 0.02236 | chr7:151199891-151216071 | Epigenome browser | Genome browser |
chr12 | 112440223 | 112440388 | + | 0.000000000004689 | chr12:112426513-112450539 | Epigenome browser | Genome browser |
chr19 | 33491128 | 33491417 | - | 0.004083 | chr19:33490877-33492404 | Epigenome browser | Genome browser |
chr12 | 53836023 | 53836326 | - | 0.001853 | chr12:53836133-53840752 | Epigenome browser | Genome browser |
chr1 | 55666997 | 55667302 | + | 0.00004478 | chr1:55666086-55680430 | Epigenome browser | Genome browser |
chr18 | 12860316 | 12860585 | + | 0.002367 | chr18:12856224-12860561 | Epigenome browser | Genome browser |
chr16 | 89559230 | 89559529 | + | 0.0203 | chr16:89557397-89560737 | Epigenome browser | Genome browser |
chr20 | 37490311 | 37490617 | - | 0.003411 | chr20:37490177-37494365 | Epigenome browser | Genome browser |
chr3 | 185305521 | 185305826 | - | 0.001865 | chr3:185304322-185308248 | Epigenome browser | Genome browser |
chr7 | 73596074 | 73596344 | - | 0.004686 | chr7:73589182-73603033 | Epigenome browser | Genome browser |
chr5 | 138856210 | 138856506 | + | 0.005693 | chr5:138847532-138861342 | Epigenome browser | Genome browser |
chr22 | 41416560 | 41416858 | + | 0.04852 | chr22:41416431-41417862 | Epigenome browser | Genome browser |
chr1 | 28054312 | 28054616 | - | 0.03169 | chr1:28052682-28054353 | Epigenome browser | Genome browser |
chr12 | 98913727 | 98914037 | - | 0.000003632 | chr12:98910592-98917696 | Epigenome browser | Genome browser |
chr8 | 100033569 | 100033878 | + | 0.01481 | chr8:100029804-100033735 | Epigenome browser | Genome browser |
chr1 | 156455629 | 156455897 | - | 0.004414 | chr1:156449710-156469725 | Epigenome browser | Genome browser |
chr17 | 73247509 | 73247809 | + | 0.0005633 | chr17:73245246-73248923 | Epigenome browser | Genome browser |
chr9 | 15507366 | 15507657 | + | 0.004985 | chr9:15494599-15510189 | Epigenome browser | Genome browser |
chr20 | 1266459 | 1266763 | + | 0.03954 | chr20:1264186-1269273 | Epigenome browser | Genome browser |
chr5 | 34742752 | 34743066 | - | 0.001161 | chr5:34742831-34743970 | Epigenome browser | Genome browser |
chr9 | 97013910 | 97014201 | + | 0.04526 | chr9:97012037-97014000 | Epigenome browser | Genome browser |
chr20 | 43519142 | 43519448 | - | 0.0116 | chr20:43515276-43530981 | Epigenome browser | Genome browser |
chr17 | 30339754 | 30340059 | + | 0.004951 | chr17:30335663-30339998 | Epigenome browser | Genome browser |
chr1 | 236691402 | 236691694 | + | 0.003371 | chr1:236691666-236698680 | Epigenome browser | Genome browser |
chr16 | 3859185 | 3859476 | - | 0.00106 | chr16:3853408-3865521 | Epigenome browser | Genome browser |
chr3 | 50120049 | 50120354 | - | 0.00000000000002347 | chr3:50119548-50121301 | Epigenome browser | Genome browser |
chr16 | 53491171 | 53491470 | - | 0.000000000001143 | chr16:53482281-53502490 | Epigenome browser | Genome browser |
chr14 | 62187678 | 62187988 | + | 0.02933 | chr14:62175049-62188123 | Epigenome browser | Genome browser |
chr8 | 29927644 | 29927935 | + | 0.00222 | chr8:29920019-29938134 | Epigenome browser | Genome browser |
chr6 | 4016889 | 4017200 | + | 0.03102 | chr6:4007982-4018528 | Epigenome browser | Genome browser |
chr13 | 41571398 | 41571691 | - | 0.004725 | chr13:41556843-41590980 | Epigenome browser | Genome browser |
chr1 | 90078114 | 90078414 | + | 0.000002167 | chr1:90065935-90083337 | Epigenome browser | Genome browser |
chr17 | 76746610 | 76746903 | + | 0.0001546 | chr17:76702321-76776916 | Epigenome browser | Genome browser |
chr5 | 65006538 | 65006843 | + | 0.01291 | chr5:65006768-65017354 | Epigenome browser | Genome browser |
chr4 | 15647047 | 15647349 | - | 0.01883 | chr4:15646096-15648162 | Epigenome browser | Genome browser |
chr22 | 29171605 | 29171901 | + | 0.01683 | chr22:29169305-29174032 | Epigenome browser | Genome browser |
chr1 | 26528169 | 26528478 | - | 0.01868 | chr1:26526363-26531692 | Epigenome browser | Genome browser |
chr13 | 41898500 | 41898809 | - | 0.001987 | chr13:41898593-41899229 | Epigenome browser | Genome browser |
chr7 | 101498878 | 101499174 | + | 0.01253 | chr7:101497986-101501586 | Epigenome browser | Genome browser |
chr3 | 195805248 | 195805556 | + | 0.0005241 | chr3:195803030-195808283 | Epigenome browser | Genome browser |
chr2 | 85105369 | 85105666 | + | 0.0006477 | chr2:85095707-85106991 | Epigenome browser | Genome browser |
chr3 | 39100286 | 39100587 | + | 0.02339 | chr3:39099592-39101367 | Epigenome browser | Genome browser |
chr9 | 92305891 | 92306152 | - | 0.009495 | chr9:92304657-92307674 | Epigenome browser | Genome browser |
chr18 | 19181878 | 19182175 | - | 0.0000211 | chr18:19180876-19182019 | Epigenome browser | Genome browser |
chr2 | 74207348 | 74207625 | + | 0.00006018 | chr2:74205105-74211802 | Epigenome browser | Genome browser |
chr2 | 42435567 | 42435872 | - | 0.009544 | chr2:42398172-42471289 | Epigenome browser | Genome browser |
chr5 | 130709991 | 130710243 | + | 0.000004681 | chr5:130696438-130733885 | Epigenome browser | Genome browser |
chr9 | 131326418 | 131326713 | + | 0.006629 | chr9:131325269-131326944 | Epigenome browser | Genome browser |
chr3 | 43340683 | 43340967 | - | 0.03104 | chr3:43329261-43360709 | Epigenome browser | Genome browser |
chr8 | 141243309 | 141243602 | - | 0.00000002625 | chr8:141243421-141245053 | Epigenome browser | Genome browser |
chr4 | 103786369 | 103786666 | + | 0.001123 | chr4:103784704-103789921 | Epigenome browser | Genome browser |
chr19 | 18198916 | 18199199 | + | 0.0003844 | chr19:18194198-18205032 | Epigenome browser | Genome browser |
chr1 | 148244891 | 148245198 | + | 0.004337 | chr1:148244057-148245055 | Epigenome browser | Genome browser |
chr17 | 2518733 | 2519032 | - | 0.0271 | chr17:2497948-2525134 | Epigenome browser | Genome browser |
chr2 | 9689220 | 9689522 | + | 0.004715 | chr2:9682954-9695584 | Epigenome browser | Genome browser |
chr20 | 52459808 | 52460112 | + | 0.00001588 | chr20:52449508-52465681 | Epigenome browser | Genome browser |
chr3 | 135899296 | 135899571 | + | 0.04298 | chr3:135889096-135912658 | Epigenome browser | Genome browser |
chr15 | 55515423 | 55515735 | + | 0.002228 | chr15:55512733-55518524 | Epigenome browser | Genome browser |
chr18 | 43792957 | 43793265 | - | 0.01923 | chr18:43786959-43795285 | Epigenome browser | Genome browser |
chr17 | 16188619 | 16188896 | + | 0.004579 | chr17:16187378-16193659 | Epigenome browser | Genome browser |
chr5 | 34917457 | 34917763 | + | 0.03856 | chr5:34916053-34919070 | Epigenome browser | Genome browser |
chr22 | 40494974 | 40495282 | + | 0.005691 | chr22:40493846-40495013 | Epigenome browser | Genome browser |
chr21 | 36321032 | 36321350 | - | 0.028 | chr21:36301059-36323777 | Epigenome browser | Genome browser |
chr17 | 47835706 | 47836043 | + | 0.03765 | chr17:47835664-47840717 | Epigenome browser | Genome browser |
chrX | 21455538 | 21455800 | - | 0.02496 | chrX:21455783-21458526 | Epigenome browser | Genome browser |
chr5 | 53871199 | 53871492 | - | 0.00953 | chr5:53870048-53871399 | Epigenome browser | Genome browser |
chr20 | 32220278 | 32220552 | - | 0.03931 | chr20:32220410-32222083 | Epigenome browser | Genome browser |
chr12 | 6835505 | 6835796 | + | 0.03201 | chr12:6833215-6835549 | Epigenome browser | Genome browser |
chr6 | 159291505 | 159291688 | + | 0.00000001868 | chr6:159291069-159292340 | Epigenome browser | Genome browser |
chr12 | 112439985 | 112440217 | + | 0.00000001041 | chr12:112426513-112450539 | Epigenome browser | Genome browser |
chr12 | 122222177 | 122222475 | + | 0.0137 | chr12:122218512-122230369 | Epigenome browser | Genome browser |
chr11 | 33320738 | 33321037 | + | 0.002372 | chr11:33320663-33321748 | Epigenome browser | Genome browser |
chr1 | 165647291 | 165647604 | + | 0.03463 | chr1:165647138-165649301 | Epigenome browser | Genome browser |
chr6 | 42003407 | 42003713 | - | 0.0003035 | chr6:42002171-42015404 | Epigenome browser | Genome browser |
chr22 | 36672537 | 36672817 | + | 0.02861 | chr22:36672341-36674831 | Epigenome browser | Genome browser |
chr19 | 16694920 | 16695088 | + | 0.0000007126 | chr19:16690465-16701869 | Epigenome browser | Genome browser |
chr16 | 18831287 | 18831584 | - | 0.0005557 | chr16:18830307-18832630 | Epigenome browser | Genome browser |
chr20 | 46138895 | 46139191 | + | 0.01254 | chr20:46131324-46140285 | Epigenome browser | Genome browser |
chr20 | 34325032 | 34325332 | + | 0.03208 | chr20:34317025-34329143 | Epigenome browser | Genome browser |
chr12 | 105630768 | 105631064 | + | 0.001895 | chr12:105630068-105631343 | Epigenome browser | Genome browser |
chr1 | 155163820 | 155164105 | + | 0.03313 | chr1:155161760-155164772 | Epigenome browser | Genome browser |
chr1 | 32582766 | 32583072 | - | 0.0007267 | chr1:32574117-32583008 | Epigenome browser | Genome browser |
chr12 | 65068207 | 65068372 | + | 0.0000000003414 | chr12:65022736-65092834 | Epigenome browser | Genome browser |
chr3 | 112207461 | 112207758 | - | 0.002046 | chr3:112207369-112217466 | Epigenome browser | Genome browser |
chr2 | 85213719 | 85214020 | + | 0.01346 | chr2:85211576-85219723 | Epigenome browser | Genome browser |
chr22 | 40507825 | 40508121 | + | 0.003857 | chr22:40499939-40515052 | Epigenome browser | Genome browser |
chr4 | 83995994 | 83996280 | + | 0.005559 | chr4:83995748-83997163 | Epigenome browser | Genome browser |
chr1 | 1786320 | 1786611 | + | 0.01169 | chr1:1783001-1799671 | Epigenome browser | Genome browser |
chr7 | 106766252 | 106766554 | + | 0.0003002 | chr7:106765075-106766706 | Epigenome browser | Genome browser |
chr17 | 28060921 | 28061238 | - | 0.02405 | chr17:28058851-28061028 | Epigenome browser | Genome browser |
chr5 | 96003436 | 96003750 | + | 0.01892 | chr5:96003520-96006351 | Epigenome browser | Genome browser |
chr12 | 897773 | 898052 | + | 0.002264 | chr12:893272-907442 | Epigenome browser | Genome browser |
chr16 | 28154962 | 28155255 | - | 0.003041 | chr16:28146587-28162787 | Epigenome browser | Genome browser |
chr4 | 78711859 | 78712116 | - | 0.006443 | chr4:78705115-78739596 | Epigenome browser | Genome browser |
chr1 | 226861912 | 226862197 | - | 0.00000004293 | chr1:226836402-226891304 | Epigenome browser | Genome browser |
chr19 | 2091720 | 2092023 | + | 0.0001032 | chr19:2085095-2095134 | Epigenome browser | Genome browser |
chr19 | 19777102 | 19777411 | - | 0.04793 | chr19:19775955-19779437 | Epigenome browser | Genome browser |
chrX | 118814664 | 118814959 | + | 0.000000001485 | chrX:118812619-118824401 | Epigenome browser | Genome browser |
chr8 | 134629248 | 134629549 | - | 0.0000001694 | chr8:134626465-134631551 | Epigenome browser | Genome browser |
chr20 | 62412202 | 62412523 | + | 0.02622 | chr20:62412406-62414552 | Epigenome browser | Genome browser |
chr20 | 35644133 | 35644422 | - | 0.000003004 | chr20:35641803-35647442 | Epigenome browser | Genome browser |
chr5 | 179035647 | 179035937 | + | 0.01327 | chr5:179033982-179039412 | Epigenome browser | Genome browser |
chr8 | 128997281 | 128997577 | - | 0.0003828 | chr8:128979252-129015106 | Epigenome browser | Genome browser |
chr15 | 93357423 | 93357708 | - | 0.0002148 | chr15:93352813-93359067 | Epigenome browser | Genome browser |
chr16 | 67618238 | 67618528 | - | 0.04971 | chr16:67618196-67620146 | Epigenome browser | Genome browser |
chr8 | 23082992 | 23083296 | - | 0.000002833 | chr8:23082735-23091196 | Epigenome browser | Genome browser |
chr7 | 48127295 | 48127606 | - | 0.0001551 | chr7:48122056-48128650 | Epigenome browser | Genome browser |
chr3 | 138480333 | 138480632 | + | 0.001846 | chr3:138479537-138481787 | Epigenome browser | Genome browser |
chr1 | 45188452 | 45188760 | + | 0.00000007247 | chr1:45184302-45190073 | Epigenome browser | Genome browser |
chr19 | 50005397 | 50005693 | + | 0.01465 | chr19:50004249-50007654 | Epigenome browser | Genome browser |
chr1 | 62188059 | 62188338 | - | 0.03217 | chr1:62186920-62190836 | Epigenome browser | Genome browser |
chr7 | 99759888 | 99760190 | + | 0.00000007961 | chr7:99759815-99762491 | Epigenome browser | Genome browser |
chr19 | 39441436 | 39441729 | - | 0.02409 | chr19:39440457-39441916 | Epigenome browser | Genome browser |
chr5 | 118644279 | 118644569 | + | 0.0000000000001636 | chr5:118635391-118707921 | Epigenome browser | Genome browser |
chr12 | 51721252 | 51721550 | - | 0.009257 | chr12:51717604-51724984 | Epigenome browser | Genome browser |
chr22 | 25780894 | 25781067 | + | 0.03848 | chr22:25781053-25783571 | Epigenome browser | Genome browser |
chr17 | 73136905 | 73137215 | + | 0.01162 | chr17:73136006-73138286 | Epigenome browser | Genome browser |
chr4 | 103789227 | 103789524 | - | 0.02141 | chr4:103784704-103789921 | Epigenome browser | Genome browser |
chr3 | 48521928 | 48522182 | + | 0.004785 | chr3:48517409-48522460 | Epigenome browser | Genome browser |
chr20 | 47901125 | 47901428 | - | 0.00153 | chr20:47895262-47901471 | Epigenome browser | Genome browser |
chr2 | 224626692 | 224626983 | - | 0.007152 | chr2:224624902-224627129 | Epigenome browser | Genome browser |
chr19 | 3181587 | 3181897 | + | 0.000000157 | chr19:3181363-3185866 | Epigenome browser | Genome browser |
chr21 | 38748530 | 38748798 | + | 0.01748 | chr21:38740554-38761359 | Epigenome browser | Genome browser |
chr19 | 47245812 | 47246117 | - | 0.0285 | chr19:47243557-47249068 | Epigenome browser | Genome browser |
chr2 | 11461599 | 11461635 | + | 0.002706 | chr2:11460696-11461929 | Epigenome browser | Genome browser |
chr7 | 139913109 | 139913431 | + | 0.01107 | chr7:139913388-139914683 | Epigenome browser | Genome browser |
chr17 | 5231967 | 5232244 | + | 0.003338 | chr17:5232081-5234807 | Epigenome browser | Genome browser |
chr20 | 3308831 | 3309133 | - | 0.0003066 | chr20:3307848-3311345 | Epigenome browser | Genome browser |
chr17 | 80603717 | 80604014 | + | 0.04233 | chr17:80602865-80605921 | Epigenome browser | Genome browser |
chr1 | 31960026 | 31960190 | + | 0.0044 | chr1:31959427-31961072 | Epigenome browser | Genome browser |
chr9 | 140133794 | 140134090 | + | 0.01796 | chr9:140132526-140134847 | Epigenome browser | Genome browser |
chr4 | 71598637 | 71598786 | + | 0.002743 | chr4:71598673-71604413 | Epigenome browser | Genome browser |